RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 SPATA8Q6RVD6 105 aa1.84□□□□□ -2.11
PDLIM1P4-201ENST00000504327 MUC17Q685J3 4493 aa1.83□□□□□ -2.12
PDLIM1P4-201ENST00000504327 K7EQZ3 153 aa1.83□□□□□ -2.12
PDLIM1P4-201ENST00000504327 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
PDLIM1P4-201ENST00000504327 MRPL34Q9BQ48 92 aaKnown RBP1.81□□□□□ -2.12
PDLIM1P4-201ENST00000504327 MMP24-AS1A0A0U1RRL7 71 aa1.8□□□□□ -2.12
PDLIM1P4-201ENST00000504327 SPINK7P58062 85 aa1.8□□□□□ -2.12
PDLIM1P4-201ENST00000504327 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
PDLIM1P4-201ENST00000504327 RPL37P61927 97 aaKnown RBP1.79□□□□□ -2.12
PDLIM1P4-201ENST00000504327 WFDC13Q8IUB5 93 aa1.79□□□□□ -2.12
PDLIM1P4-201ENST00000504327 SYNE2Q8WXH0 6885 aaKnown RBP1.78□□□□□ -2.12
PDLIM1P4-201ENST00000504327 KRTAP4-1Q9BYQ7 146 aa1.78□□□□□ -2.12
PDLIM1P4-201ENST00000504327 C9orf92A6NGG3 77 aa1.77□□□□□ -2.13
PDLIM1P4-201ENST00000504327 A0A1B0GU69 56 aa1.76□□□□□ -2.13
PDLIM1P4-201ENST00000504327 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
PDLIM1P4-201ENST00000504327 KRTAP19-2Q3LHN2 52 aa1.73□□□□□ -2.13
PDLIM1P4-201ENST00000504327 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
PDLIM1P4-201ENST00000504327 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
PDLIM1P4-201ENST00000504327 USH2AO75445 5202 aa1.71□□□□□ -2.14
PDLIM1P4-201ENST00000504327 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
PDLIM1P4-201ENST00000504327 KMT2DO14686 5537 aa1.69□□□□□ -2.14
PDLIM1P4-201ENST00000504327 MT1HP80294 61 aa1.68□□□□□ -2.14
PDLIM1P4-201ENST00000504327 COX6B2Q6YFQ2 88 aa1.68□□□□□ -2.14
PDLIM1P4-201ENST00000504327 H1FX-AS1Q4G0G2 97 aa1.67□□□□□ -2.14
PDLIM1P4-201ENST00000504327 KRTAP12-3P60328 96 aa1.66□□□□□ -2.14
PDLIM1P4-201ENST00000504327 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.15
PDLIM1P4-201ENST00000504327 KRTAP2-4Q9BYR9 128 aa1.65□□□□□ -2.15
PDLIM1P4-201ENST00000504327 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
PDLIM1P4-201ENST00000504327 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
PDLIM1P4-201ENST00000504327 S4R3F8 94 aa1.63□□□□□ -2.15
PDLIM1P4-201ENST00000504327 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
PDLIM1P4-201ENST00000504327 H0YAA0 97 aa1.61□□□□□ -2.15
PDLIM1P4-201ENST00000504327 M0R2T5 61 aa1.6□□□□□ -2.15
PDLIM1P4-201ENST00000504327 MT2AP02795 61 aa1.59□□□□□ -2.15
PDLIM1P4-201ENST00000504327 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.16
PDLIM1P4-201ENST00000504327 MT1FP04733 61 aa1.58□□□□□ -2.16
PDLIM1P4-201ENST00000504327 CRIPTQ9P021 101 aa1.58□□□□□ -2.16
PDLIM1P4-201ENST00000504327 M0QZ58 72 aa1.56□□□□□ -2.16
PDLIM1P4-201ENST00000504327 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
PDLIM1P4-201ENST00000504327 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
PDLIM1P4-201ENST00000504327 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
PDLIM1P4-201ENST00000504327 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
PDLIM1P4-201ENST00000504327 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
PDLIM1P4-201ENST00000504327 A0A0D9SG42 100 aa1.46□□□□□ -2.18
PDLIM1P4-201ENST00000504327 MT1BP07438 61 aa1.46□□□□□ -2.18
PDLIM1P4-201ENST00000504327 KRTAP19-8Q3LI54 63 aa1.46□□□□□ -2.18
PDLIM1P4-201ENST00000504327 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
PDLIM1P4-201ENST00000504327 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
PDLIM1P4-201ENST00000504327 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
PDLIM1P4-201ENST00000504327 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
PDLIM1P4-201ENST00000504327 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
PDLIM1P4-201ENST00000504327 MT1XP80297 61 aa1.38□□□□□ -2.19
PDLIM1P4-201ENST00000504327 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
PDLIM1P4-201ENST00000504327 TNP1P09430 55 aa1.37□□□□□ -2.19
PDLIM1P4-201ENST00000504327 KRTAP8-1Q8IUC2 63 aa1.28□□□□□ -2.2
PDLIM1P4-201ENST00000504327 SPRR2FQ96RM1 72 aa1.28□□□□□ -2.2
PDLIM1P4-201ENST00000504327 SPRR2EP22531 72 aa1.25□□□□□ -2.21
PDLIM1P4-201ENST00000504327 SPRR2BP35325 72 aa1.25□□□□□ -2.21
PDLIM1P4-201ENST00000504327 SPRR2AP35326 72 aa1.25□□□□□ -2.21
PDLIM1P4-201ENST00000504327 KRTAP19-7Q3SYF9 63 aa1.24□□□□□ -2.21
PDLIM1P4-201ENST00000504327 MT1EP04732 61 aa1.21□□□□□ -2.22
PDLIM1P4-201ENST00000504327 SPRR2DP22532 72 aa1.2□□□□□ -2.22
PDLIM1P4-201ENST00000504327 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
PDLIM1P4-201ENST00000504327 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
PDLIM1P4-201ENST00000504327 MT1GP13640 62 aa1.17□□□□□ -2.22
PDLIM1P4-201ENST00000504327 MT1LQ93083 61 aa1.17□□□□□ -2.22
PDLIM1P4-201ENST00000504327 MT1MQ8N339 61 aa1.16□□□□□ -2.22
PDLIM1P4-201ENST00000504327 MT4P47944 62 aa1.05□□□□□ -2.24
PDLIM1P4-201ENST00000504327 SYNE1Q8NF91 8797 aaKnown RBP1.03□□□□□ -2.24
PDLIM1P4-201ENST00000504327 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
PDLIM1P4-201ENST00000504327 MT1AP04731 61 aa0.99□□□□□ -2.25
PDLIM1P4-201ENST00000504327 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
PDLIM1P4-201ENST00000504327 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
PDLIM1P4-201ENST00000504327 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
PDLIM1P4-201ENST00000504327 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
PDLIM1P4-201ENST00000504327 PRM1P04553 51 aa0.83□□□□□ -2.28
PDLIM1P4-201ENST00000504327 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 140.6 ms