RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 R4GN34 69 aa1.67□□□□□ -2.14
PCAT4-201ENST00000504263 MUC2Q02817 5179 aa1.66□□□□□ -2.14
PCAT4-201ENST00000504263 KRTAP10-12P60413 245 aa1.65□□□□□ -2.14
PCAT4-201ENST00000504263 C9orf92A6NGG3 77 aa1.63□□□□□ -2.15
PCAT4-201ENST00000504263 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
PCAT4-201ENST00000504263 MUC17Q685J3 4493 aa1.57□□□□□ -2.16
PCAT4-201ENST00000504263 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
PCAT4-201ENST00000504263 TNP1P09430 55 aa1.54□□□□□ -2.16
PCAT4-201ENST00000504263 LCE3AQ5TA76 89 aa1.53□□□□□ -2.16
PCAT4-201ENST00000504263 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
PCAT4-201ENST00000504263 FLGP20930 4061 aaPredicted RBP1.52□□□□□ -2.17
PCAT4-201ENST00000504263 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
PCAT4-201ENST00000504263 MT3P25713 68 aa1.51□□□□□ -2.17
PCAT4-201ENST00000504263 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
PCAT4-201ENST00000504263 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
PCAT4-201ENST00000504263 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
PCAT4-201ENST00000504263 M0R2T5 61 aa1.49□□□□□ -2.17
PCAT4-201ENST00000504263 MT1HP80294 61 aa1.48□□□□□ -2.17
PCAT4-201ENST00000504263 KRTAP19-2Q3LHN2 52 aa1.48□□□□□ -2.17
PCAT4-201ENST00000504263 KRTAP10-10P60014 251 aa1.44□□□□□ -2.18
PCAT4-201ENST00000504263 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
PCAT4-201ENST00000504263 USH2AO75445 5202 aa1.4□□□□□ -2.19
PCAT4-201ENST00000504263 KRTAP20-1Q3LI63 56 aa1.39□□□□□ -2.19
PCAT4-201ENST00000504263 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
PCAT4-201ENST00000504263 MT2AP02795 61 aa1.38□□□□□ -2.19
PCAT4-201ENST00000504263 MT1FP04733 61 aa1.36□□□□□ -2.19
PCAT4-201ENST00000504263 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
PCAT4-201ENST00000504263 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.19
PCAT4-201ENST00000504263 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.2
PCAT4-201ENST00000504263 KRTAP2-3P0C7H8 128 aa1.33□□□□□ -2.2
PCAT4-201ENST00000504263 LCE1FQ5T754 118 aa1.33□□□□□ -2.2
PCAT4-201ENST00000504263 KRTAP2-4Q9BYR9 128 aa1.33□□□□□ -2.2
PCAT4-201ENST00000504263 KRTAP2-1Q9BYU5 128 aa1.33□□□□□ -2.2
PCAT4-201ENST00000504263 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
PCAT4-201ENST00000504263 KRTAP12-3P60328 96 aa1.33□□□□□ -2.2
PCAT4-201ENST00000504263 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
PCAT4-201ENST00000504263 NEBP20929 6669 aa1.32□□□□□ -2.2
PCAT4-201ENST00000504263 SPRR2GQ9BYE4 73 aa1.32□□□□□ -2.2
PCAT4-201ENST00000504263 KRTAP19-6Q3LI70 58 aa1.31□□□□□ -2.2
PCAT4-201ENST00000504263 LCE3CQ5T5A8 94 aa1.27□□□□□ -2.21
PCAT4-201ENST00000504263 KRTAP19-8Q3LI54 63 aa1.25□□□□□ -2.21
PCAT4-201ENST00000504263 KRTAP6-3Q3LI67 103 aa1.25□□□□□ -2.21
PCAT4-201ENST00000504263 MT1BP07438 61 aa1.24□□□□□ -2.21
PCAT4-201ENST00000504263 MUC12Q9UKN1 5478 aa1.24□□□□□ -2.21
PCAT4-201ENST00000504263 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
PCAT4-201ENST00000504263 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
PCAT4-201ENST00000504263 KRTAP19-5Q3LI72 72 aa1.21□□□□□ -2.22
PCAT4-201ENST00000504263 KMT2DO14686 5537 aa1.21□□□□□ -2.22
PCAT4-201ENST00000504263 MT1XP80297 61 aa1.2□□□□□ -2.22
PCAT4-201ENST00000504263 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
PCAT4-201ENST00000504263 SPRR2FQ96RM1 72 aa1.16□□□□□ -2.22
PCAT4-201ENST00000504263 SPRR2EP22531 72 aa1.14□□□□□ -2.23
PCAT4-201ENST00000504263 SPRR2BP35325 72 aa1.14□□□□□ -2.23
PCAT4-201ENST00000504263 SPRR2AP35326 72 aa1.14□□□□□ -2.23
PCAT4-201ENST00000504263 LCE3EQ5T5B0 92 aa1.14□□□□□ -2.23
PCAT4-201ENST00000504263 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
PCAT4-201ENST00000504263 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
PCAT4-201ENST00000504263 SPRR2DP22532 72 aa1.11□□□□□ -2.23
PCAT4-201ENST00000504263 DSTQ03001 7570 aaKnown RBP1.11□□□□□ -2.23
PCAT4-201ENST00000504263 MT1EP04732 61 aa1.1□□□□□ -2.23
PCAT4-201ENST00000504263 MT1AP04731 61 aa1.09□□□□□ -2.24
PCAT4-201ENST00000504263 KRTAP19-7Q3SYF9 63 aa1.08□□□□□ -2.24
PCAT4-201ENST00000504263 MT1LQ93083 61 aa1.08□□□□□ -2.24
PCAT4-201ENST00000504263 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
PCAT4-201ENST00000504263 PRM1P04553 51 aa1.05□□□□□ -2.24
PCAT4-201ENST00000504263 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
PCAT4-201ENST00000504263 MT1GP13640 62 aa1.03□□□□□ -2.25
PCAT4-201ENST00000504263 LCE3DQ9BYE3 92 aa1.01□□□□□ -2.25
PCAT4-201ENST00000504263 MT1MQ8N339 61 aa0.99□□□□□ -2.25
PCAT4-201ENST00000504263 SYNE1Q8NF91 8797 aaKnown RBP0.98□□□□□ -2.25
PCAT4-201ENST00000504263 MT4P47944 62 aa0.96□□□□□ -2.25
PCAT4-201ENST00000504263 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
PCAT4-201ENST00000504263 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
PCAT4-201ENST00000504263 KRTAP6-1Q3LI64 71 aa0.88□□□□□ -2.27
PCAT4-201ENST00000504263 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
PCAT4-201ENST00000504263 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
PCAT4-201ENST00000504263 MUC16Q8WXI7 14507 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 38.6 ms