RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 KRTAP9-6A0A140TA67 174 aa5.2□□□□□ -1.58
SNF8-203ENST00000504000 MT1LQ93083 61 aa5.16□□□□□ -1.58
SNF8-203ENST00000504000 MT1EP04732 61 aa5.15□□□□□ -1.59
SNF8-203ENST00000504000 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
SNF8-203ENST00000504000 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
SNF8-203ENST00000504000 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
SNF8-203ENST00000504000 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
SNF8-203ENST00000504000 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
SNF8-203ENST00000504000 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
SNF8-203ENST00000504000 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
SNF8-203ENST00000504000 MT1GP13640 62 aa4.83□□□□□ -1.64
SNF8-203ENST00000504000 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
SNF8-203ENST00000504000 MT1MQ8N339 61 aa4.79□□□□□ -1.64
SNF8-203ENST00000504000 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
SNF8-203ENST00000504000 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
SNF8-203ENST00000504000 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.66
SNF8-203ENST00000504000 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SNF8-203ENST00000504000 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
SNF8-203ENST00000504000 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
SNF8-203ENST00000504000 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
SNF8-203ENST00000504000 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
SNF8-203ENST00000504000 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
SNF8-203ENST00000504000 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
SNF8-203ENST00000504000 MT1AP04731 61 aa4.49□□□□□ -1.69
SNF8-203ENST00000504000 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
SNF8-203ENST00000504000 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
SNF8-203ENST00000504000 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
SNF8-203ENST00000504000 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
SNF8-203ENST00000504000 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
SNF8-203ENST00000504000 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
SNF8-203ENST00000504000 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
SNF8-203ENST00000504000 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
SNF8-203ENST00000504000 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
SNF8-203ENST00000504000 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
SNF8-203ENST00000504000 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
SNF8-203ENST00000504000 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
SNF8-203ENST00000504000 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
SNF8-203ENST00000504000 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
SNF8-203ENST00000504000 SPRR2EP22531 72 aa4.05□□□□□ -1.76
SNF8-203ENST00000504000 SPRR2BP35325 72 aa4.05□□□□□ -1.76
SNF8-203ENST00000504000 SPRR2AP35326 72 aa4.05□□□□□ -1.76
SNF8-203ENST00000504000 PRM1P04553 51 aa4.04□□□□□ -1.76
SNF8-203ENST00000504000 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
SNF8-203ENST00000504000 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
SNF8-203ENST00000504000 MT3P25713 68 aa3.92□□□□□ -1.78
SNF8-203ENST00000504000 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
SNF8-203ENST00000504000 SPRR2DP22532 72 aa3.88□□□□□ -1.79
SNF8-203ENST00000504000 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
SNF8-203ENST00000504000 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
SNF8-203ENST00000504000 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
SNF8-203ENST00000504000 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
SNF8-203ENST00000504000 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
SNF8-203ENST00000504000 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
SNF8-203ENST00000504000 NEBP20929 6669 aa3.37□□□□□ -1.87
SNF8-203ENST00000504000 MT4P47944 62 aa3.35□□□□□ -1.87
SNF8-203ENST00000504000 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
SNF8-203ENST00000504000 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
SNF8-203ENST00000504000 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
SNF8-203ENST00000504000 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
SNF8-203ENST00000504000 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
SNF8-203ENST00000504000 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
SNF8-203ENST00000504000 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
SNF8-203ENST00000504000 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
SNF8-203ENST00000504000 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SNF8-203ENST00000504000 LCE1FQ5T754 118 aa3□□□□□ -1.93
SNF8-203ENST00000504000 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
SNF8-203ENST00000504000 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
SNF8-203ENST00000504000 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
SNF8-203ENST00000504000 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
SNF8-203ENST00000504000 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
SNF8-203ENST00000504000 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SNF8-203ENST00000504000 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
SNF8-203ENST00000504000 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
SNF8-203ENST00000504000 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
SNF8-203ENST00000504000 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
SNF8-203ENST00000504000 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
SNF8-203ENST00000504000 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
SNF8-203ENST00000504000 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 183.1 ms