RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-207ENST00000503974 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.84
PDLIM5-207ENST00000503974 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
PDLIM5-207ENST00000503974 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
PDLIM5-207ENST00000503974 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
PDLIM5-207ENST00000503974 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
PDLIM5-207ENST00000503974 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
PDLIM5-207ENST00000503974 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
PDLIM5-207ENST00000503974 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
PDLIM5-207ENST00000503974 KMT2DO14686 5537 aa3.49□□□□□ -1.85
PDLIM5-207ENST00000503974 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
PDLIM5-207ENST00000503974 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
PDLIM5-207ENST00000503974 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
PDLIM5-207ENST00000503974 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
PDLIM5-207ENST00000503974 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
PDLIM5-207ENST00000503974 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
PDLIM5-207ENST00000503974 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.86
PDLIM5-207ENST00000503974 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.86
PDLIM5-207ENST00000503974 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
PDLIM5-207ENST00000503974 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
PDLIM5-207ENST00000503974 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
PDLIM5-207ENST00000503974 MT1EP04732 61 aa3.33□□□□□ -1.88
PDLIM5-207ENST00000503974 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
PDLIM5-207ENST00000503974 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
PDLIM5-207ENST00000503974 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
PDLIM5-207ENST00000503974 SPRR2EP22531 72 aa3.29□□□□□ -1.88
PDLIM5-207ENST00000503974 SPRR2BP35325 72 aa3.29□□□□□ -1.88
PDLIM5-207ENST00000503974 SPRR2AP35326 72 aa3.29□□□□□ -1.88
PDLIM5-207ENST00000503974 NEBP20929 6669 aa3.29□□□□□ -1.88
PDLIM5-207ENST00000503974 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
PDLIM5-207ENST00000503974 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
PDLIM5-207ENST00000503974 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
PDLIM5-207ENST00000503974 MT1LQ93083 61 aa3.23□□□□□ -1.89
PDLIM5-207ENST00000503974 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
PDLIM5-207ENST00000503974 MT1GP13640 62 aa3.19□□□□□ -1.9
PDLIM5-207ENST00000503974 SPRR2DP22532 72 aa3.18□□□□□ -1.9
PDLIM5-207ENST00000503974 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
PDLIM5-207ENST00000503974 MT1MQ8N339 61 aa3.15□□□□□ -1.9
PDLIM5-207ENST00000503974 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
PDLIM5-207ENST00000503974 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
PDLIM5-207ENST00000503974 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
PDLIM5-207ENST00000503974 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
PDLIM5-207ENST00000503974 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
PDLIM5-207ENST00000503974 PRM1P04553 51 aa2.93□□□□□ -1.94
PDLIM5-207ENST00000503974 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
PDLIM5-207ENST00000503974 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
PDLIM5-207ENST00000503974 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
PDLIM5-207ENST00000503974 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
PDLIM5-207ENST00000503974 MT1AP04731 61 aa2.75□□□□□ -1.97
PDLIM5-207ENST00000503974 MT4P47944 62 aa2.75□□□□□ -1.97
PDLIM5-207ENST00000503974 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
PDLIM5-207ENST00000503974 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
PDLIM5-207ENST00000503974 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
PDLIM5-207ENST00000503974 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
PDLIM5-207ENST00000503974 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
PDLIM5-207ENST00000503974 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -2
PDLIM5-207ENST00000503974 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
PDLIM5-207ENST00000503974 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
PDLIM5-207ENST00000503974 MT3P25713 68 aa2.49□□□□□ -2.01
PDLIM5-207ENST00000503974 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.01
PDLIM5-207ENST00000503974 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
PDLIM5-207ENST00000503974 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
PDLIM5-207ENST00000503974 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
PDLIM5-207ENST00000503974 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
PDLIM5-207ENST00000503974 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
PDLIM5-207ENST00000503974 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
PDLIM5-207ENST00000503974 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PDLIM5-207ENST00000503974 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
PDLIM5-207ENST00000503974 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
PDLIM5-207ENST00000503974 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
PDLIM5-207ENST00000503974 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
PDLIM5-207ENST00000503974 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
PDLIM5-207ENST00000503974 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
PDLIM5-207ENST00000503974 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
PDLIM5-207ENST00000503974 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
PDLIM5-207ENST00000503974 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
PDLIM5-207ENST00000503974 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 85.3 ms