RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 NDUFC1O43677 76 aa1.4□□□□□ -2.19
UBE3D-205ENST00000503942 COX7CP15954 63 aa1.4□□□□□ -2.19
UBE3D-205ENST00000503942 CCDC179H3BU77 68 aa1.39□□□□□ -2.19
UBE3D-205ENST00000503942 KTN1-AS1Q86SY8 53 aa1.39□□□□□ -2.19
UBE3D-205ENST00000503942 H7BZZ5 65 aa1.38□□□□□ -2.19
UBE3D-205ENST00000503942 MT1BP07438 61 aa1.38□□□□□ -2.19
UBE3D-205ENST00000503942 ACYP2P14621 99 aa1.38□□□□□ -2.19
UBE3D-205ENST00000503942 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
UBE3D-205ENST00000503942 SPRR2GQ9BYE4 73 aa1.37□□□□□ -2.19
UBE3D-205ENST00000503942 H0YAA0 97 aa1.36□□□□□ -2.19
UBE3D-205ENST00000503942 KRTAP19-6Q3LI70 58 aa1.36□□□□□ -2.19
UBE3D-205ENST00000503942 CHKB-CPT1BH3BT56 60 aa1.35□□□□□ -2.19
UBE3D-205ENST00000503942 Q5VV11 94 aa1.34□□□□□ -2.19
UBE3D-205ENST00000503942 M0QZ58 72 aa1.33□□□□□ -2.2
UBE3D-205ENST00000503942 PMAIP1Q13794 54 aa1.32□□□□□ -2.2
UBE3D-205ENST00000503942 LINC01554Q52M75 96 aa1.32□□□□□ -2.2
UBE3D-205ENST00000503942 SPTSSBQ8NFR3 76 aa1.32□□□□□ -2.2
UBE3D-205ENST00000503942 CRIPTQ9P021 101 aa1.32□□□□□ -2.2
UBE3D-205ENST00000503942 A6NN06 94 aa1.31□□□□□ -2.2
UBE3D-205ENST00000503942 MT1XP80297 61 aa1.31□□□□□ -2.2
UBE3D-205ENST00000503942 Q1T7F1 81 aa1.31□□□□□ -2.2
UBE3D-205ENST00000503942 SPATA8Q6RVD6 105 aa1.29□□□□□ -2.2
UBE3D-205ENST00000503942 KMT2DO14686 5537 aa1.28□□□□□ -2.2
UBE3D-205ENST00000503942 A0A0D9SG42 100 aa1.28□□□□□ -2.2
UBE3D-205ENST00000503942 ATP5EP56381 51 aaPredicted RBP1.28□□□□□ -2.2
UBE3D-205ENST00000503942 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
UBE3D-205ENST00000503942 MACF1Q9UPN3 7388 aaKnown RBP1.28□□□□□ -2.21
UBE3D-205ENST00000503942 SERP1Q9Y6X1 66 aa1.27□□□□□ -2.21
UBE3D-205ENST00000503942 A0A1B0GU69 56 aa1.26□□□□□ -2.21
UBE3D-205ENST00000503942 LINC01558Q9Y6Z2 57 aa1.26□□□□□ -2.21
UBE3D-205ENST00000503942 MUC12Q9UKN1 5478 aa1.23□□□□□ -2.21
UBE3D-205ENST00000503942 PRR15LQ9BU68 103 aa1.23□□□□□ -2.21
UBE3D-205ENST00000503942 SYNE2Q8WXH0 6885 aaKnown RBP1.22□□□□□ -2.21
UBE3D-205ENST00000503942 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
UBE3D-205ENST00000503942 UQCR11O14957 56 aa1.2□□□□□ -2.22
UBE3D-205ENST00000503942 KRTAP8-1Q8IUC2 63 aa1.2□□□□□ -2.22
UBE3D-205ENST00000503942 SPRR2FQ96RM1 72 aa1.2□□□□□ -2.22
UBE3D-205ENST00000503942 C10orf95Q9H7T3 257 aa1.2□□□□□ -2.22
UBE3D-205ENST00000503942 RPS28P62857 69 aaKnown RBP1.19□□□□□ -2.22
UBE3D-205ENST00000503942 MIR22HGQ0VDD5 57 aa1.19□□□□□ -2.22
UBE3D-205ENST00000503942 SPRR2EP22531 72 aa1.17□□□□□ -2.22
UBE3D-205ENST00000503942 SPRR2BP35325 72 aa1.17□□□□□ -2.22
UBE3D-205ENST00000503942 SPRR2AP35326 72 aa1.17□□□□□ -2.22
UBE3D-205ENST00000503942 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
UBE3D-205ENST00000503942 KRTAP19-5Q3LI72 72 aa1.16□□□□□ -2.22
UBE3D-205ENST00000503942 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
UBE3D-205ENST00000503942 NEBP20929 6669 aa1.15□□□□□ -2.23
UBE3D-205ENST00000503942 MT1EP04732 61 aa1.15□□□□□ -2.23
UBE3D-205ENST00000503942 TNP1P09430 55 aa1.14□□□□□ -2.23
UBE3D-205ENST00000503942 SPRR2DP22532 72 aa1.12□□□□□ -2.23
UBE3D-205ENST00000503942 KRTAP20-1Q3LI63 56 aa1.12□□□□□ -2.23
UBE3D-205ENST00000503942 CDC42SE1Q9NRR8 79 aa1.12□□□□□ -2.23
UBE3D-205ENST00000503942 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
UBE3D-205ENST00000503942 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
UBE3D-205ENST00000503942 MT1LQ93083 61 aa1.11□□□□□ -2.23
UBE3D-205ENST00000503942 KRTAP2-3P0C7H8 128 aa1.1□□□□□ -2.23
UBE3D-205ENST00000503942 KRTAP2-4Q9BYR9 128 aa1.1□□□□□ -2.23
UBE3D-205ENST00000503942 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.23
UBE3D-205ENST00000503942 MT1MQ8N339 61 aa1.09□□□□□ -2.23
UBE3D-205ENST00000503942 MT1GP13640 62 aa1.08□□□□□ -2.24
UBE3D-205ENST00000503942 ROMO1P60602 79 aa1.08□□□□□ -2.24
UBE3D-205ENST00000503942 BRK1Q8WUW1 75 aa1.07□□□□□ -2.24
UBE3D-205ENST00000503942 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
UBE3D-205ENST00000503942 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
UBE3D-205ENST00000503942 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
UBE3D-205ENST00000503942 MT4P47944 62 aa1□□□□□ -2.25
UBE3D-205ENST00000503942 KRTAP6-1Q3LI64 71 aa0.95□□□□□ -2.26
UBE3D-205ENST00000503942 INE1O15225 51 aa0.94□□□□□ -2.26
UBE3D-205ENST00000503942 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
UBE3D-205ENST00000503942 MT1AP04731 61 aa0.93□□□□□ -2.26
UBE3D-205ENST00000503942 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.27
UBE3D-205ENST00000503942 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
UBE3D-205ENST00000503942 MUC5ACP98088 5654 aa0.81□□□□□ -2.28
UBE3D-205ENST00000503942 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
UBE3D-205ENST00000503942 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
UBE3D-205ENST00000503942 PRM1P04553 51 aa0.58□□□□□ -2.32
UBE3D-205ENST00000503942 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
UBE3D-205ENST00000503942 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 56.8 ms