RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
PDLIM7-210ENST00000503827 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
PDLIM7-210ENST00000503827 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
PDLIM7-210ENST00000503827 SPATA8Q6RVD6 105 aa5.02□□□□□ -1.61
PDLIM7-210ENST00000503827 TNP1P09430 55 aa5.01□□□□□ -1.61
PDLIM7-210ENST00000503827 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
PDLIM7-210ENST00000503827 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
PDLIM7-210ENST00000503827 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
PDLIM7-210ENST00000503827 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
PDLIM7-210ENST00000503827 SERP1Q9Y6X1 66 aa4.93□□□□□ -1.62
PDLIM7-210ENST00000503827 SEC61GP60059 68 aa4.92□□□□□ -1.62
PDLIM7-210ENST00000503827 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
PDLIM7-210ENST00000503827 A0A1B0GU33 70 aa4.87□□□□□ -1.63
PDLIM7-210ENST00000503827 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.64
PDLIM7-210ENST00000503827 CCDC179H3BU77 68 aa4.81□□□□□ -1.64
PDLIM7-210ENST00000503827 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
PDLIM7-210ENST00000503827 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
PDLIM7-210ENST00000503827 COX7CP15954 63 aa4.77□□□□□ -1.65
PDLIM7-210ENST00000503827 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
PDLIM7-210ENST00000503827 SMIM20Q8N5G0 67 aa4.74□□□□□ -1.65
PDLIM7-210ENST00000503827 SNURFQ9Y675 71 aa4.74□□□□□ -1.65
PDLIM7-210ENST00000503827 TMEM258P61165 79 aa4.73□□□□□ -1.65
PDLIM7-210ENST00000503827 SERP2Q8N6R1 65 aa4.73□□□□□ -1.65
PDLIM7-210ENST00000503827 MT1AP04731 61 aa4.71□□□□□ -1.66
PDLIM7-210ENST00000503827 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
PDLIM7-210ENST00000503827 COA5Q86WW8 74 aa4.7□□□□□ -1.66
PDLIM7-210ENST00000503827 A8MU10 97 aa4.69□□□□□ -1.66
PDLIM7-210ENST00000503827 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
PDLIM7-210ENST00000503827 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
PDLIM7-210ENST00000503827 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
PDLIM7-210ENST00000503827 ATP5EP56381 51 aaPredicted RBP4.6□□□□□ -1.67
PDLIM7-210ENST00000503827 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
PDLIM7-210ENST00000503827 H7BZZ5 65 aa4.53□□□□□ -1.68
PDLIM7-210ENST00000503827 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
PDLIM7-210ENST00000503827 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
PDLIM7-210ENST00000503827 A0A1B0GU69 56 aa4.5□□□□□ -1.69
PDLIM7-210ENST00000503827 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
PDLIM7-210ENST00000503827 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
PDLIM7-210ENST00000503827 MT3P25713 68 aa4.35□□□□□ -1.71
PDLIM7-210ENST00000503827 V9GYY9 64 aa4.35□□□□□ -1.71
PDLIM7-210ENST00000503827 Q1T7F1 81 aa4.34□□□□□ -1.71
PDLIM7-210ENST00000503827 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
PDLIM7-210ENST00000503827 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
PDLIM7-210ENST00000503827 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
PDLIM7-210ENST00000503827 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
PDLIM7-210ENST00000503827 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
PDLIM7-210ENST00000503827 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
PDLIM7-210ENST00000503827 PSPHP1O15172 72 aa4.12□□□□□ -1.75
PDLIM7-210ENST00000503827 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
PDLIM7-210ENST00000503827 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
PDLIM7-210ENST00000503827 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
PDLIM7-210ENST00000503827 A6NED7 52 aa4.05□□□□□ -1.76
PDLIM7-210ENST00000503827 UQCR11O14957 56 aa4.01□□□□□ -1.77
PDLIM7-210ENST00000503827 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
PDLIM7-210ENST00000503827 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
PDLIM7-210ENST00000503827 K7ERS5 55 aa3.95□□□□□ -1.78
PDLIM7-210ENST00000503827 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
PDLIM7-210ENST00000503827 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
PDLIM7-210ENST00000503827 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
PDLIM7-210ENST00000503827 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
PDLIM7-210ENST00000503827 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
PDLIM7-210ENST00000503827 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
PDLIM7-210ENST00000503827 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
PDLIM7-210ENST00000503827 ROMO1P60602 79 aa3.53□□□□□ -1.84
PDLIM7-210ENST00000503827 H3BS24 57 aa3.45□□□□□ -1.86
PDLIM7-210ENST00000503827 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
PDLIM7-210ENST00000503827 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
PDLIM7-210ENST00000503827 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
PDLIM7-210ENST00000503827 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
PDLIM7-210ENST00000503827 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
PDLIM7-210ENST00000503827 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
PDLIM7-210ENST00000503827 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
PDLIM7-210ENST00000503827 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
PDLIM7-210ENST00000503827 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
PDLIM7-210ENST00000503827 INE1O15225 51 aa2.76□□□□□ -1.97
PDLIM7-210ENST00000503827 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PDLIM7-210ENST00000503827 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
PDLIM7-210ENST00000503827 PRM1P04553 51 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms