RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
RNF4-204ENST00000503659 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
RNF4-204ENST00000503659 UQCR11O14957 56 aa6.36□□□□□ -1.39
RNF4-204ENST00000503659 KRTAP4-3Q9BYR4 195 aa6.36□□□□□ -1.39
RNF4-204ENST00000503659 HMCN1Q96RW7 5635 aa6.3□□□□□ -1.4
RNF4-204ENST00000503659 MT4P47944 62 aa6.29□□□□□ -1.4
RNF4-204ENST00000503659 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
RNF4-204ENST00000503659 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
RNF4-204ENST00000503659 MIR22HGQ0VDD5 57 aa6.23□□□□□ -1.41
RNF4-204ENST00000503659 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
RNF4-204ENST00000503659 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
RNF4-204ENST00000503659 PSPHP1O15172 72 aa6.11□□□□□ -1.43
RNF4-204ENST00000503659 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
RNF4-204ENST00000503659 Q1T7F1 81 aa6.08□□□□□ -1.44
RNF4-204ENST00000503659 V9GYY9 64 aa6.08□□□□□ -1.44
RNF4-204ENST00000503659 AHNAK2Q8IVF2 5795 aa6.07□□□□□ -1.44
RNF4-204ENST00000503659 K7ERS5 55 aa6.06□□□□□ -1.44
RNF4-204ENST00000503659 KRTAP5-10Q6L8G5 202 aa6.05□□□□□ -1.44
RNF4-204ENST00000503659 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
RNF4-204ENST00000503659 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
RNF4-204ENST00000503659 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
RNF4-204ENST00000503659 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
RNF4-204ENST00000503659 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
RNF4-204ENST00000503659 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
RNF4-204ENST00000503659 A6NED7 52 aa5.88□□□□□ -1.47
RNF4-204ENST00000503659 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
RNF4-204ENST00000503659 KRTAP5-7Q6L8G8 165 aa5.85□□□□□ -1.47
RNF4-204ENST00000503659 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
RNF4-204ENST00000503659 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
RNF4-204ENST00000503659 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
RNF4-204ENST00000503659 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
RNF4-204ENST00000503659 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
RNF4-204ENST00000503659 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
RNF4-204ENST00000503659 ROMO1P60602 79 aa5.69□□□□□ -1.5
RNF4-204ENST00000503659 PCP4P48539 62 aa5.61□□□□□ -1.51
RNF4-204ENST00000503659 MT1AP04731 61 aa5.53□□□□□ -1.52
RNF4-204ENST00000503659 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
RNF4-204ENST00000503659 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
RNF4-204ENST00000503659 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
RNF4-204ENST00000503659 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
RNF4-204ENST00000503659 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
RNF4-204ENST00000503659 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
RNF4-204ENST00000503659 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
RNF4-204ENST00000503659 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
RNF4-204ENST00000503659 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
RNF4-204ENST00000503659 MUC5BQ9HC84 5762 aaPredicted RBP5.05□□□□□ -1.6
RNF4-204ENST00000503659 MT3P25713 68 aa5.04□□□□□ -1.6
RNF4-204ENST00000503659 AHNAKQ09666 5890 aaKnown RBP5.03□□□□□ -1.6
RNF4-204ENST00000503659 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
RNF4-204ENST00000503659 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
RNF4-204ENST00000503659 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
RNF4-204ENST00000503659 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
RNF4-204ENST00000503659 PMAIP1Q13794 54 aa4.66□□□□□ -1.66
RNF4-204ENST00000503659 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
RNF4-204ENST00000503659 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
RNF4-204ENST00000503659 H3BS24 57 aa4.41□□□□□ -1.7
RNF4-204ENST00000503659 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
RNF4-204ENST00000503659 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
RNF4-204ENST00000503659 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
RNF4-204ENST00000503659 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
RNF4-204ENST00000503659 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
RNF4-204ENST00000503659 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
RNF4-204ENST00000503659 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
RNF4-204ENST00000503659 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
RNF4-204ENST00000503659 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
RNF4-204ENST00000503659 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
RNF4-204ENST00000503659 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
RNF4-204ENST00000503659 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
RNF4-204ENST00000503659 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
RNF4-204ENST00000503659 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
RNF4-204ENST00000503659 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
RNF4-204ENST00000503659 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
RNF4-204ENST00000503659 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
RNF4-204ENST00000503659 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
RNF4-204ENST00000503659 PRM1P04553 51 aa2.93□□□□□ -1.94
RNF4-204ENST00000503659 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
RNF4-204ENST00000503659 INE1O15225 51 aa2.47□□□□□ -2.01
RNF4-204ENST00000503659 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms