RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
ARHGEF28-205ENST00000503341 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
ARHGEF28-205ENST00000503341 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
ARHGEF28-205ENST00000503341 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
ARHGEF28-205ENST00000503341 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
ARHGEF28-205ENST00000503341 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
ARHGEF28-205ENST00000503341 MT1GP13640 62 aa6.49□□□□□ -1.37
ARHGEF28-205ENST00000503341 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
ARHGEF28-205ENST00000503341 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.38
ARHGEF28-205ENST00000503341 MT1MQ8N339 61 aa6.44□□□□□ -1.38
ARHGEF28-205ENST00000503341 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
ARHGEF28-205ENST00000503341 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
ARHGEF28-205ENST00000503341 KRTAP4-3Q9BYR4 195 aa6.37□□□□□ -1.39
ARHGEF28-205ENST00000503341 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
ARHGEF28-205ENST00000503341 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
ARHGEF28-205ENST00000503341 LCE1AQ5T7P2 110 aa6.24□□□□□ -1.41
ARHGEF28-205ENST00000503341 KRTAP6-3Q3LI67 103 aa6.16□□□□□ -1.42
ARHGEF28-205ENST00000503341 SPRR2EP22531 72 aa6.14□□□□□ -1.43
ARHGEF28-205ENST00000503341 SPRR2BP35325 72 aa6.14□□□□□ -1.43
ARHGEF28-205ENST00000503341 SPRR2AP35326 72 aa6.14□□□□□ -1.43
ARHGEF28-205ENST00000503341 INE1O15225 51 aa6.11□□□□□ -1.43
ARHGEF28-205ENST00000503341 MDN1Q9NU22 5596 aa6.07□□□□□ -1.44
ARHGEF28-205ENST00000503341 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
ARHGEF28-205ENST00000503341 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
ARHGEF28-205ENST00000503341 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
ARHGEF28-205ENST00000503341 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
ARHGEF28-205ENST00000503341 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
ARHGEF28-205ENST00000503341 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
ARHGEF28-205ENST00000503341 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
ARHGEF28-205ENST00000503341 SPRR2DP22532 72 aa5.9□□□□□ -1.46
ARHGEF28-205ENST00000503341 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
ARHGEF28-205ENST00000503341 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
ARHGEF28-205ENST00000503341 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
ARHGEF28-205ENST00000503341 MT1AP04731 61 aa5.72□□□□□ -1.49
ARHGEF28-205ENST00000503341 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
ARHGEF28-205ENST00000503341 NEBP20929 6669 aa5.64□□□□□ -1.51
ARHGEF28-205ENST00000503341 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
ARHGEF28-205ENST00000503341 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
ARHGEF28-205ENST00000503341 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
ARHGEF28-205ENST00000503341 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
ARHGEF28-205ENST00000503341 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
ARHGEF28-205ENST00000503341 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.54
ARHGEF28-205ENST00000503341 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
ARHGEF28-205ENST00000503341 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
ARHGEF28-205ENST00000503341 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
ARHGEF28-205ENST00000503341 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
ARHGEF28-205ENST00000503341 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
ARHGEF28-205ENST00000503341 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
ARHGEF28-205ENST00000503341 MT3P25713 68 aa5.17□□□□□ -1.58
ARHGEF28-205ENST00000503341 MT4P47944 62 aa5.14□□□□□ -1.59
ARHGEF28-205ENST00000503341 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
ARHGEF28-205ENST00000503341 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
ARHGEF28-205ENST00000503341 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
ARHGEF28-205ENST00000503341 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
ARHGEF28-205ENST00000503341 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
ARHGEF28-205ENST00000503341 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
ARHGEF28-205ENST00000503341 PRM1P04553 51 aa4.5□□□□□ -1.69
ARHGEF28-205ENST00000503341 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
ARHGEF28-205ENST00000503341 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
ARHGEF28-205ENST00000503341 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
ARHGEF28-205ENST00000503341 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
ARHGEF28-205ENST00000503341 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
ARHGEF28-205ENST00000503341 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
ARHGEF28-205ENST00000503341 KRTAP5-8O75690 187 aa4.15□□□□□ -1.74
ARHGEF28-205ENST00000503341 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
ARHGEF28-205ENST00000503341 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
ARHGEF28-205ENST00000503341 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
ARHGEF28-205ENST00000503341 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
ARHGEF28-205ENST00000503341 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
ARHGEF28-205ENST00000503341 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
ARHGEF28-205ENST00000503341 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
ARHGEF28-205ENST00000503341 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
ARHGEF28-205ENST00000503341 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
ARHGEF28-205ENST00000503341 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ARHGEF28-205ENST00000503341 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
ARHGEF28-205ENST00000503341 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
ARHGEF28-205ENST00000503341 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
ARHGEF28-205ENST00000503341 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 265 ms