RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 SPINK6Q6UWN8 80 aa1.97□□□□□ -2.09
CPNE4-203ENST00000503204 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
CPNE4-203ENST00000503204 VPS13BQ7Z7G8 4022 aa1.96□□□□□ -2.1
CPNE4-203ENST00000503204 RPS29P62273 56 aaKnown RBP1.95□□□□□ -2.1
CPNE4-203ENST00000503204 A0A0D9SG42 100 aa1.94□□□□□ -2.1
CPNE4-203ENST00000503204 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
CPNE4-203ENST00000503204 LRP1Q07954 4544 aaKnown RBP1.92□□□□□ -2.1
CPNE4-203ENST00000503204 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CPNE4-203ENST00000503204 PKHD1L1Q86WI1 4243 aa1.9□□□□□ -2.11
CPNE4-203ENST00000503204 HTN3P15516 51 aa1.9□□□□□ -2.11
CPNE4-203ENST00000503204 DEFB135Q30KP9 77 aa1.88□□□□□ -2.11
CPNE4-203ENST00000503204 FAT3Q8TDW7 4589 aa1.88□□□□□ -2.11
CPNE4-203ENST00000503204 TNXBP22105 4242 aa1.84□□□□□ -2.11
CPNE4-203ENST00000503204 LPAP08519 4548 aa1.83□□□□□ -2.12
CPNE4-203ENST00000503204 DEFB4AO15263 64 aa1.81□□□□□ -2.12
CPNE4-203ENST00000503204 TNP1P09430 55 aa1.8□□□□□ -2.12
CPNE4-203ENST00000503204 C9orf92A6NGG3 77 aa1.79□□□□□ -2.12
CPNE4-203ENST00000503204 SMR3BP02814 79 aaPredicted RBP1.79□□□□□ -2.12
CPNE4-203ENST00000503204 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
CPNE4-203ENST00000503204 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
CPNE4-203ENST00000503204 DNAH8Q96JB1 4490 aa1.75□□□□□ -2.13
CPNE4-203ENST00000503204 NEBP20929 6669 aa1.72□□□□□ -2.13
CPNE4-203ENST00000503204 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
CPNE4-203ENST00000503204 USH2AO75445 5202 aa1.72□□□□□ -2.13
CPNE4-203ENST00000503204 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
CPNE4-203ENST00000503204 MT1HL1P0DM35 61 aa1.7□□□□□ -2.14
CPNE4-203ENST00000503204 MACF1Q9UPN3 7388 aaKnown RBP1.69□□□□□ -2.14
CPNE4-203ENST00000503204 KRTAP10-4P60372 401 aaPredicted RBP1.67□□□□□ -2.14
CPNE4-203ENST00000503204 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.14
CPNE4-203ENST00000503204 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
CPNE4-203ENST00000503204 KRTAP20-1Q3LI63 56 aa1.61□□□□□ -2.15
CPNE4-203ENST00000503204 FLGP20930 4061 aaPredicted RBP1.59□□□□□ -2.15
CPNE4-203ENST00000503204 KMT2DO14686 5537 aa1.59□□□□□ -2.15
CPNE4-203ENST00000503204 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.15
CPNE4-203ENST00000503204 MUC17Q685J3 4493 aa1.59□□□□□ -2.16
CPNE4-203ENST00000503204 MDN1Q9NU22 5596 aa1.56□□□□□ -2.16
CPNE4-203ENST00000503204 KRTAP4-1Q9BYQ7 146 aa1.56□□□□□ -2.16
CPNE4-203ENST00000503204 M0R2T5 61 aa1.54□□□□□ -2.16
CPNE4-203ENST00000503204 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
CPNE4-203ENST00000503204 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
CPNE4-203ENST00000503204 KRTAP2-1Q9BYU5 128 aa1.54□□□□□ -2.16
CPNE4-203ENST00000503204 MT1HP80294 61 aa1.48□□□□□ -2.17
CPNE4-203ENST00000503204 KRTAP19-2Q3LHN2 52 aa1.45□□□□□ -2.18
CPNE4-203ENST00000503204 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
CPNE4-203ENST00000503204 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
CPNE4-203ENST00000503204 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
CPNE4-203ENST00000503204 SPRR2GQ9BYE4 73 aa1.35□□□□□ -2.19
CPNE4-203ENST00000503204 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
CPNE4-203ENST00000503204 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
CPNE4-203ENST00000503204 MT2AP02795 61 aa1.29□□□□□ -2.2
CPNE4-203ENST00000503204 MT1FP04733 61 aa1.29□□□□□ -2.2
CPNE4-203ENST00000503204 MT1AP04731 61 aa1.28□□□□□ -2.2
CPNE4-203ENST00000503204 SPRR2EP22531 72 aa1.28□□□□□ -2.2
CPNE4-203ENST00000503204 SPRR2BP35325 72 aa1.28□□□□□ -2.2
CPNE4-203ENST00000503204 SPRR2AP35326 72 aa1.28□□□□□ -2.2
CPNE4-203ENST00000503204 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
CPNE4-203ENST00000503204 SPRR2DP22532 72 aa1.23□□□□□ -2.21
CPNE4-203ENST00000503204 PRM1P04553 51 aa1.22□□□□□ -2.21
CPNE4-203ENST00000503204 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
CPNE4-203ENST00000503204 MT1EP04732 61 aa1.21□□□□□ -2.22
CPNE4-203ENST00000503204 KRTAP19-8Q3LI54 63 aa1.21□□□□□ -2.22
CPNE4-203ENST00000503204 SPRR2FQ96RM1 72 aa1.21□□□□□ -2.22
CPNE4-203ENST00000503204 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
CPNE4-203ENST00000503204 MT1LQ93083 61 aa1.17□□□□□ -2.22
CPNE4-203ENST00000503204 MT4P47944 62 aa1.15□□□□□ -2.23
CPNE4-203ENST00000503204 MT1XP80297 61 aa1.15□□□□□ -2.23
CPNE4-203ENST00000503204 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
CPNE4-203ENST00000503204 MT1BP07438 61 aa1.08□□□□□ -2.24
CPNE4-203ENST00000503204 SYNE1Q8NF91 8797 aaKnown RBP1.07□□□□□ -2.24
CPNE4-203ENST00000503204 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
CPNE4-203ENST00000503204 KRTAP19-7Q3SYF9 63 aa1.02□□□□□ -2.25
CPNE4-203ENST00000503204 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
CPNE4-203ENST00000503204 MT1GP13640 62 aa0.96□□□□□ -2.26
CPNE4-203ENST00000503204 KRTAP20-2Q3LI61 65 aa0.96□□□□□ -2.26
CPNE4-203ENST00000503204 MT1MQ8N339 61 aa0.94□□□□□ -2.26
CPNE4-203ENST00000503204 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
CPNE4-203ENST00000503204 KRTAP6-1Q3LI64 71 aa0.82□□□□□ -2.28
CPNE4-203ENST00000503204 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 53.2 ms