RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.65
CPNE4-203ENST00000503204 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
CPNE4-203ENST00000503204 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
CPNE4-203ENST00000503204 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
CPNE4-203ENST00000503204 FOXD1Q16676 465 aa20.01■□□□□ 0.79
CPNE4-203ENST00000503204 PLPPR3Q6T4P5 718 aa20.01■□□□□ 0.79
CPNE4-203ENST00000503204 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
CPNE4-203ENST00000503204 ADRA2BP18089 450 aa19.1■□□□□ 0.65
CPNE4-203ENST00000503204 PIAS4Q8N2W9 510 aaPredicted RBP18.85■□□□□ 0.61
CPNE4-203ENST00000503204 MSH5O43196 834 aa18.56■□□□□ 0.56
CPNE4-203ENST00000503204 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
CPNE4-203ENST00000503204 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
CPNE4-203ENST00000503204 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
CPNE4-203ENST00000503204 DMRT2Q9Y5R5 561 aa17.2■□□□□ 0.34
CPNE4-203ENST00000503204 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
CPNE4-203ENST00000503204 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
CPNE4-203ENST00000503204 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
CPNE4-203ENST00000503204 KCNA4P22459 653 aa17.01■□□□□ 0.31
CPNE4-203ENST00000503204 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
CPNE4-203ENST00000503204 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
CPNE4-203ENST00000503204 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
CPNE4-203ENST00000503204 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
CPNE4-203ENST00000503204 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
CPNE4-203ENST00000503204 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
CPNE4-203ENST00000503204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.15
CPNE4-203ENST00000503204 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
CPNE4-203ENST00000503204 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
CPNE4-203ENST00000503204 FOXD4L1Q9NU39 408 aa15.73■□□□□ 0.11
CPNE4-203ENST00000503204 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
CPNE4-203ENST00000503204 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
CPNE4-203ENST00000503204 ZBTB22O15209 634 aa15.63■□□□□ 0.09
CPNE4-203ENST00000503204 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
CPNE4-203ENST00000503204 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
CPNE4-203ENST00000503204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
CPNE4-203ENST00000503204 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
CPNE4-203ENST00000503204 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
CPNE4-203ENST00000503204 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
CPNE4-203ENST00000503204 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
CPNE4-203ENST00000503204 APLP2Q06481 763 aa15.43■□□□□ 0.06
CPNE4-203ENST00000503204 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
CPNE4-203ENST00000503204 CAPN15O75808 1086 aa15.27■□□□□ 0.04
CPNE4-203ENST00000503204 ATXN8OSP0DMR3 200 aa15.23■□□□□ 0.03
CPNE4-203ENST00000503204 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
CPNE4-203ENST00000503204 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
CPNE4-203ENST00000503204 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
CPNE4-203ENST00000503204 DSG3P32926 999 aa15.04■□□□□ -0
CPNE4-203ENST00000503204 ABCB7O75027 752 aa14.93□□□□□ -0.02
CPNE4-203ENST00000503204 POLA2Q14181 598 aa14.88□□□□□ -0.03
CPNE4-203ENST00000503204 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
CPNE4-203ENST00000503204 FBLN2P98095 1184 aa14.57□□□□□ -0.08
CPNE4-203ENST00000503204 MKRN4PQ13434 485 aaPredicted RBP14.46□□□□□ -0.09
CPNE4-203ENST00000503204 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
CPNE4-203ENST00000503204 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
CPNE4-203ENST00000503204 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
CPNE4-203ENST00000503204 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
CPNE4-203ENST00000503204 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
CPNE4-203ENST00000503204 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
CPNE4-203ENST00000503204 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
CPNE4-203ENST00000503204 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
CPNE4-203ENST00000503204 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
CPNE4-203ENST00000503204 REM2Q8IYK8 340 aaPredicted RBP14□□□□□ -0.17
CPNE4-203ENST00000503204 FKBP8Q14318 412 aa13.99□□□□□ -0.17
CPNE4-203ENST00000503204 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
CPNE4-203ENST00000503204 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
CPNE4-203ENST00000503204 PROM2Q8N271 834 aa13.87□□□□□ -0.19
CPNE4-203ENST00000503204 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
CPNE4-203ENST00000503204 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
CPNE4-203ENST00000503204 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
CPNE4-203ENST00000503204 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
CPNE4-203ENST00000503204 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
CPNE4-203ENST00000503204 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
CPNE4-203ENST00000503204 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
CPNE4-203ENST00000503204 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
CPNE4-203ENST00000503204 POTEHQ6S545 545 aa13.5□□□□□ -0.25
CPNE4-203ENST00000503204 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
CPNE4-203ENST00000503204 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
CPNE4-203ENST00000503204 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
CPNE4-203ENST00000503204 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
CPNE4-203ENST00000503204 MIER1Q8N108 512 aa13.39□□□□□ -0.27
CPNE4-203ENST00000503204 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
CPNE4-203ENST00000503204 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
CPNE4-203ENST00000503204 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
CPNE4-203ENST00000503204 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
CPNE4-203ENST00000503204 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
CPNE4-203ENST00000503204 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
CPNE4-203ENST00000503204 HAX1O00165 279 aa13.18□□□□□ -0.3
CPNE4-203ENST00000503204 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
CPNE4-203ENST00000503204 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
CPNE4-203ENST00000503204 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
CPNE4-203ENST00000503204 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
CPNE4-203ENST00000503204 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
CPNE4-203ENST00000503204 NUBP1P53384 320 aa13.06□□□□□ -0.32
CPNE4-203ENST00000503204 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
CPNE4-203ENST00000503204 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
CPNE4-203ENST00000503204 EVX2Q03828 476 aa13.01□□□□□ -0.33
CPNE4-203ENST00000503204 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
CPNE4-203ENST00000503204 FAM212AQ96EL1 285 aa13□□□□□ -0.33
CPNE4-203ENST00000503204 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-203ENST00000503204 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
CPNE4-203ENST00000503204 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms