RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810		A0A1B0GU69	56 aa		4.21	□□□□□ -1.74
CDK11A-222	ENST00000498810	NDUFAF8	A1L188	74 aa		4.21	□□□□□ -1.74
CDK11A-222	ENST00000498810	SPATA8	Q6RVD6	105 aa		4.21	□□□□□ -1.74
CDK11A-222	ENST00000498810	SPINT4	Q6UDR6	99 aa		4.21	□□□□□ -1.74
CDK11A-222	ENST00000498810	KRTAP2-3	P0C7H8	128 aa		4.19	□□□□□ -1.74
CDK11A-222	ENST00000498810	KRTAP2-4	Q9BYR9	128 aa		4.19	□□□□□ -1.74
CDK11A-222	ENST00000498810	OBSCN	Q5VST9	7968 aa		4.17	□□□□□ -1.74
CDK11A-222	ENST00000498810	SPRR2D	P22532	72 aa		4.17	□□□□□ -1.74
CDK11A-222	ENST00000498810	ATP5E	P56381	51 aa	Predicted RBP	4.15	□□□□□ -1.75
CDK11A-222	ENST00000498810	SMIM26	A0A096LP01	95 aa		4.14	□□□□□ -1.75
CDK11A-222	ENST00000498810	CCDC179	H3BU77	68 aa		4.14	□□□□□ -1.75
CDK11A-222	ENST00000498810	PRR15L	Q9BU68	103 aa		4.13	□□□□□ -1.75
CDK11A-222	ENST00000498810	LCE3E	Q5T5B0	92 aa		4.11	□□□□□ -1.75
CDK11A-222	ENST00000498810	PRAC1	Q96KF2	57 aa		4.09	□□□□□ -1.75
CDK11A-222	ENST00000498810	KRTAP12-1	P59990	96 aa		4.08	□□□□□ -1.76
CDK11A-222	ENST00000498810		A8MU10	97 aa		4.05	□□□□□ -1.76
CDK11A-222	ENST00000498810	KRTAP2-1	Q9BYU5	128 aa		4.05	□□□□□ -1.76
CDK11A-222	ENST00000498810	TMEM258	P61165	79 aa		4.03	□□□□□ -1.76
CDK11A-222	ENST00000498810	KRTAP4-3	Q9BYR4	195 aa		4	□□□□□ -1.77
CDK11A-222	ENST00000498810	LINC01558	Q9Y6Z2	57 aa		3.98	□□□□□ -1.77
CDK11A-222	ENST00000498810	LCE3A	Q5TA76	89 aa		3.97	□□□□□ -1.77
CDK11A-222	ENST00000498810	MT1E	P04732	61 aa		3.95	□□□□□ -1.78
CDK11A-222	ENST00000498810	TNP1	P09430	55 aa		3.95	□□□□□ -1.78
CDK11A-222	ENST00000498810	KRTAP19-7	Q3SYF9	63 aa		3.95	□□□□□ -1.78
CDK11A-222	ENST00000498810	UQCR11	O14957	56 aa		3.94	□□□□□ -1.78
CDK11A-222	ENST00000498810	KRTAP19-3	Q7Z4W3	81 aa		3.93	□□□□□ -1.78
CDK11A-222	ENST00000498810	KRTAP19-5	Q3LI72	72 aa		3.92	□□□□□ -1.78
CDK11A-222	ENST00000498810	PP632	Q6XCG6	107 aa		3.89	□□□□□ -1.79
CDK11A-222	ENST00000498810	C10orf95	Q9H7T3	257 aa		3.88	□□□□□ -1.79
CDK11A-222	ENST00000498810		K7ERS5	55 aa		3.86	□□□□□ -1.79
CDK11A-222	ENST00000498810	MIR22HG	Q0VDD5	57 aa		3.85	□□□□□ -1.79
CDK11A-222	ENST00000498810	DST	Q03001	7570 aa	Known RBP	3.83	□□□□□ -1.8
CDK11A-222	ENST00000498810	MT1G	P13640	62 aa		3.83	□□□□□ -1.8
CDK11A-222	ENST00000498810		V9GYY9	64 aa		3.83	□□□□□ -1.8
CDK11A-222	ENST00000498810	PSPHP1	O15172	72 aa		3.8	□□□□□ -1.8
CDK11A-222	ENST00000498810	GPR98	Q8WXG9	6306 aa		3.79	□□□□□ -1.8
CDK11A-222	ENST00000498810	MT1L	Q93083	61 aa		3.78	□□□□□ -1.8
CDK11A-222	ENST00000498810	MT1M	Q8N339	61 aa		3.77	□□□□□ -1.81
CDK11A-222	ENST00000498810		Q1T7F1	81 aa		3.73	□□□□□ -1.81
CDK11A-222	ENST00000498810	KRTAP25-1	Q3LHN0	102 aa		3.73	□□□□□ -1.81
CDK11A-222	ENST00000498810		A6NED7	52 aa		3.72	□□□□□ -1.81
CDK11A-222	ENST00000498810	KRTAP12-3	P60328	96 aa		3.72	□□□□□ -1.81
CDK11A-222	ENST00000498810	KRTAP5-2	Q701N4	177 aa		3.72	□□□□□ -1.81
CDK11A-222	ENST00000498810	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.71	□□□□□ -1.82
CDK11A-222	ENST00000498810	MT4	P47944	62 aa		3.64	□□□□□ -1.83
CDK11A-222	ENST00000498810	CDC42SE1	Q9NRR8	79 aa		3.62	□□□□□ -1.83
CDK11A-222	ENST00000498810	HMCN1	Q96RW7	5635 aa		3.58	□□□□□ -1.84
CDK11A-222	ENST00000498810	RPS28	P62857	69 aa	Known RBP	3.53	□□□□□ -1.84
CDK11A-222	ENST00000498810	AHNAK2	Q8IVF2	5795 aa		3.51	□□□□□ -1.85
CDK11A-222	ENST00000498810	ROMO1	P60602	79 aa		3.51	□□□□□ -1.85
CDK11A-222	ENST00000498810	LCE1C	Q5T751	118 aa		3.49	□□□□□ -1.85
CDK11A-222	ENST00000498810	LCE1B	Q5T7P3	118 aa		3.49	□□□□□ -1.85
CDK11A-222	ENST00000498810	KRTAP12-4	P60329	112 aa		3.4	□□□□□ -1.87
CDK11A-222	ENST00000498810	KRTAP20-2	Q3LI61	65 aa		3.36	□□□□□ -1.87
CDK11A-222	ENST00000498810	SPRR5	A0A1B0GTR4	108 aa		3.34	□□□□□ -1.87
CDK11A-222	ENST00000498810	KRTAP5-10	Q6L8G5	202 aa		3.32	□□□□□ -1.88
CDK11A-222	ENST00000498810	SYNE1	Q8NF91	8797 aa	Known RBP	3.26	□□□□□ -1.89
CDK11A-222	ENST00000498810	LCE3D	Q9BYE3	92 aa		3.25	□□□□□ -1.89
CDK11A-222	ENST00000498810	MT1A	P04731	61 aa		3.23	□□□□□ -1.89
CDK11A-222	ENST00000498810	BRK1	Q8WUW1	75 aa		3.23	□□□□□ -1.89
CDK11A-222	ENST00000498810	KRTAP5-7	Q6L8G8	165 aa		3.21	□□□□□ -1.9
CDK11A-222	ENST00000498810	KRTAP6-1	Q3LI64	71 aa		3.2	□□□□□ -1.9
CDK11A-222	ENST00000498810	KRTAP6-2	Q3LI66	62 aa		3.06	□□□□□ -1.92
CDK11A-222	ENST00000498810	KRTAP5-8	O75690	187 aa		3.04	□□□□□ -1.92
CDK11A-222	ENST00000498810	PMAIP1	Q13794	54 aa		3.01	□□□□□ -1.93
CDK11A-222	ENST00000498810	AHNAK	Q09666	5890 aa	Known RBP	2.98	□□□□□ -1.93
CDK11A-222	ENST00000498810	MUC19	Q7Z5P9	8384 aa		2.96	□□□□□ -1.94
CDK11A-222	ENST00000498810	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.91	□□□□□ -1.94
CDK11A-222	ENST00000498810	MUC5AC	P98088	5654 aa		2.91	□□□□□ -1.94
CDK11A-222	ENST00000498810	PRO0628	Q9UI54	55 aa		2.77	□□□□□ -1.97
CDK11A-222	ENST00000498810	KTN1-AS1	Q86SY8	53 aa		2.68	□□□□□ -1.98
CDK11A-222	ENST00000498810	LUZP6	Q538Z0	58 aa		2.53	□□□□□ -2
CDK11A-222	ENST00000498810	KRTAP21-2	Q3LI59	83 aa		2.51	□□□□□ -2.01
CDK11A-222	ENST00000498810	PHGR1	C9JFL3	82 aa		1.99	□□□□□ -2.09
CDK11A-222	ENST00000498810	PRM1	P04553	51 aa		1.81	□□□□□ -2.12
CDK11A-222	ENST00000498810	INE1	O15225	51 aa		1.59	□□□□□ -2.15
CDK11A-222	ENST00000498810	KRTAP21-1	Q3LI58	79 aa		1.5	□□□□□ -2.17
CDK11A-222	ENST00000498810	MUC16	Q8WXI7	14507 aa		1.29	□□□□□ -2.2

Retrieved 78 of 20,778 RNA–protein pairs in 78.3 ms