RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
HDAC6-236ENST00000498808 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
HDAC6-236ENST00000498808 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
HDAC6-236ENST00000498808 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
HDAC6-236ENST00000498808 SPATA8Q6RVD6 105 aa5.02□□□□□ -1.61
HDAC6-236ENST00000498808 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
HDAC6-236ENST00000498808 CCDC179H3BU77 68 aa5□□□□□ -1.61
HDAC6-236ENST00000498808 SNURFQ9Y675 71 aa4.99□□□□□ -1.61
HDAC6-236ENST00000498808 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
HDAC6-236ENST00000498808 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
HDAC6-236ENST00000498808 TNP1P09430 55 aa4.93□□□□□ -1.62
HDAC6-236ENST00000498808 ATP5EP56381 51 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-236ENST00000498808 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
HDAC6-236ENST00000498808 TMEM258P61165 79 aa4.92□□□□□ -1.62
HDAC6-236ENST00000498808 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
HDAC6-236ENST00000498808 H7BZZ5 65 aa4.91□□□□□ -1.62
HDAC6-236ENST00000498808 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
HDAC6-236ENST00000498808 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
HDAC6-236ENST00000498808 A0A1B0GU33 70 aa4.84□□□□□ -1.63
HDAC6-236ENST00000498808 SEC61GP60059 68 aa4.82□□□□□ -1.64
HDAC6-236ENST00000498808 RPS28P62857 69 aaKnown RBP4.75□□□□□ -1.65
HDAC6-236ENST00000498808 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
HDAC6-236ENST00000498808 COA5Q86WW8 74 aa4.74□□□□□ -1.65
HDAC6-236ENST00000498808 A8MU10 97 aa4.73□□□□□ -1.65
HDAC6-236ENST00000498808 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
HDAC6-236ENST00000498808 SMIM26A0A096LP01 95 aa4.7□□□□□ -1.66
HDAC6-236ENST00000498808 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
HDAC6-236ENST00000498808 MT1AP04731 61 aa4.66□□□□□ -1.66
HDAC6-236ENST00000498808 V9GYY9 64 aa4.64□□□□□ -1.67
HDAC6-236ENST00000498808 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
HDAC6-236ENST00000498808 PRR15LQ9BU68 103 aa4.57□□□□□ -1.68
HDAC6-236ENST00000498808 Q1T7F1 81 aa4.55□□□□□ -1.68
HDAC6-236ENST00000498808 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
HDAC6-236ENST00000498808 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
HDAC6-236ENST00000498808 A0A1B0GU69 56 aa4.53□□□□□ -1.68
HDAC6-236ENST00000498808 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
HDAC6-236ENST00000498808 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
HDAC6-236ENST00000498808 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
HDAC6-236ENST00000498808 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
HDAC6-236ENST00000498808 PSPHP1O15172 72 aa4.43□□□□□ -1.7
HDAC6-236ENST00000498808 UQCR11O14957 56 aa4.4□□□□□ -1.71
HDAC6-236ENST00000498808 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
HDAC6-236ENST00000498808 A6NED7 52 aa4.35□□□□□ -1.71
HDAC6-236ENST00000498808 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
HDAC6-236ENST00000498808 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
HDAC6-236ENST00000498808 MT3P25713 68 aa4.26□□□□□ -1.73
HDAC6-236ENST00000498808 K7ERS5 55 aa4.25□□□□□ -1.73
HDAC6-236ENST00000498808 CDC42SE1Q9NRR8 79 aa4.25□□□□□ -1.73
HDAC6-236ENST00000498808 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
HDAC6-236ENST00000498808 BRK1Q8WUW1 75 aa4.22□□□□□ -1.73
HDAC6-236ENST00000498808 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
HDAC6-236ENST00000498808 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
HDAC6-236ENST00000498808 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
HDAC6-236ENST00000498808 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
HDAC6-236ENST00000498808 ROMO1P60602 79 aa3.95□□□□□ -1.78
HDAC6-236ENST00000498808 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
HDAC6-236ENST00000498808 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
HDAC6-236ENST00000498808 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
HDAC6-236ENST00000498808 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
HDAC6-236ENST00000498808 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
HDAC6-236ENST00000498808 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
HDAC6-236ENST00000498808 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
HDAC6-236ENST00000498808 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
HDAC6-236ENST00000498808 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
HDAC6-236ENST00000498808 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
HDAC6-236ENST00000498808 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
HDAC6-236ENST00000498808 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
HDAC6-236ENST00000498808 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
HDAC6-236ENST00000498808 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
HDAC6-236ENST00000498808 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
HDAC6-236ENST00000498808 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
HDAC6-236ENST00000498808 H3BS24 57 aa2.86□□□□□ -1.95
HDAC6-236ENST00000498808 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
HDAC6-236ENST00000498808 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
HDAC6-236ENST00000498808 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
HDAC6-236ENST00000498808 INE1O15225 51 aa2.51□□□□□ -2.01
HDAC6-236ENST00000498808 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
HDAC6-236ENST00000498808 PRM1P04553 51 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 110.4 ms