RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
GARNL3-222ENST00000498801 UQCR11O14957 56 aa3.09□□□□□ -1.91
GARNL3-222ENST00000498801 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
GARNL3-222ENST00000498801 MT1XP80297 61 aa3.07□□□□□ -1.92
GARNL3-222ENST00000498801 PRO2289Q9P1D8 64 aa3.06□□□□□ -1.92
GARNL3-222ENST00000498801 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
GARNL3-222ENST00000498801 SPINT4Q6UDR6 99 aa3.05□□□□□ -1.92
GARNL3-222ENST00000498801 MIR22HGQ0VDD5 57 aa3.04□□□□□ -1.92
GARNL3-222ENST00000498801 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
GARNL3-222ENST00000498801 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
GARNL3-222ENST00000498801 A6NED7 52 aa3.01□□□□□ -1.93
GARNL3-222ENST00000498801 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
GARNL3-222ENST00000498801 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
GARNL3-222ENST00000498801 K7ERS5 55 aa2.94□□□□□ -1.94
GARNL3-222ENST00000498801 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
GARNL3-222ENST00000498801 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
GARNL3-222ENST00000498801 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
GARNL3-222ENST00000498801 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
GARNL3-222ENST00000498801 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
GARNL3-222ENST00000498801 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
GARNL3-222ENST00000498801 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
GARNL3-222ENST00000498801 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
GARNL3-222ENST00000498801 KMT2DO14686 5537 aa2.85□□□□□ -1.95
GARNL3-222ENST00000498801 TNP1P09430 55 aa2.85□□□□□ -1.95
GARNL3-222ENST00000498801 BRK1Q8WUW1 75 aa2.83□□□□□ -1.96
GARNL3-222ENST00000498801 SPRR2FQ96RM1 72 aa2.82□□□□□ -1.96
GARNL3-222ENST00000498801 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
GARNL3-222ENST00000498801 ROMO1P60602 79 aa2.78□□□□□ -1.96
GARNL3-222ENST00000498801 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
GARNL3-222ENST00000498801 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
GARNL3-222ENST00000498801 SPRR2EP22531 72 aa2.75□□□□□ -1.97
GARNL3-222ENST00000498801 SPRR2BP35325 72 aa2.75□□□□□ -1.97
GARNL3-222ENST00000498801 SPRR2AP35326 72 aa2.75□□□□□ -1.97
GARNL3-222ENST00000498801 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
GARNL3-222ENST00000498801 NEBP20929 6669 aa2.74□□□□□ -1.97
GARNL3-222ENST00000498801 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
GARNL3-222ENST00000498801 MT1EP04732 61 aa2.72□□□□□ -1.97
GARNL3-222ENST00000498801 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
GARNL3-222ENST00000498801 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
GARNL3-222ENST00000498801 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
GARNL3-222ENST00000498801 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
GARNL3-222ENST00000498801 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
GARNL3-222ENST00000498801 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
GARNL3-222ENST00000498801 SPRR2DP22532 72 aa2.66□□□□□ -1.98
GARNL3-222ENST00000498801 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
GARNL3-222ENST00000498801 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
GARNL3-222ENST00000498801 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
GARNL3-222ENST00000498801 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
GARNL3-222ENST00000498801 MT1LQ93083 61 aa2.62□□□□□ -1.99
GARNL3-222ENST00000498801 MT1GP13640 62 aa2.61□□□□□ -1.99
GARNL3-222ENST00000498801 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
GARNL3-222ENST00000498801 MT1MQ8N339 61 aa2.57□□□□□ -2
GARNL3-222ENST00000498801 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
GARNL3-222ENST00000498801 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
GARNL3-222ENST00000498801 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
GARNL3-222ENST00000498801 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
GARNL3-222ENST00000498801 MT4P47944 62 aa2.28□□□□□ -2.04
GARNL3-222ENST00000498801 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
GARNL3-222ENST00000498801 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
GARNL3-222ENST00000498801 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
GARNL3-222ENST00000498801 MT1AP04731 61 aa2.23□□□□□ -2.05
GARNL3-222ENST00000498801 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
GARNL3-222ENST00000498801 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
GARNL3-222ENST00000498801 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
GARNL3-222ENST00000498801 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
GARNL3-222ENST00000498801 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
GARNL3-222ENST00000498801 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
GARNL3-222ENST00000498801 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
GARNL3-222ENST00000498801 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
GARNL3-222ENST00000498801 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
GARNL3-222ENST00000498801 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
GARNL3-222ENST00000498801 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
GARNL3-222ENST00000498801 INE1O15225 51 aa1.71□□□□□ -2.14
GARNL3-222ENST00000498801 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
GARNL3-222ENST00000498801 PRM1P04553 51 aa1.43□□□□□ -2.18
GARNL3-222ENST00000498801 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
GARNL3-222ENST00000498801 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
GARNL3-222ENST00000498801 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms