RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 UQCR11O14957 56 aa6.56□□□□□ -1.36
ECM1-207ENST00000498579 TMEM258P61165 79 aa6.56□□□□□ -1.36
ECM1-207ENST00000498579 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
ECM1-207ENST00000498579 MT4P47944 62 aa6.46□□□□□ -1.38
ECM1-207ENST00000498579 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
ECM1-207ENST00000498579 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
ECM1-207ENST00000498579 HMCN1Q96RW7 5635 aa6.44□□□□□ -1.38
ECM1-207ENST00000498579 KRTAP5-4Q6L8H1 288 aa6.41□□□□□ -1.38
ECM1-207ENST00000498579 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
ECM1-207ENST00000498579 K7ERS5 55 aa6.36□□□□□ -1.39
ECM1-207ENST00000498579 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
ECM1-207ENST00000498579 V9GYY9 64 aa6.29□□□□□ -1.4
ECM1-207ENST00000498579 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
ECM1-207ENST00000498579 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
ECM1-207ENST00000498579 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
ECM1-207ENST00000498579 AHNAK2Q8IVF2 5795 aa6.2□□□□□ -1.42
ECM1-207ENST00000498579 PSPHP1O15172 72 aa6.17□□□□□ -1.42
ECM1-207ENST00000498579 Q1T7F1 81 aa6.16□□□□□ -1.42
ECM1-207ENST00000498579 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
ECM1-207ENST00000498579 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
ECM1-207ENST00000498579 KRTAP5-5Q701N2 237 aaPredicted RBP6.12□□□□□ -1.43
ECM1-207ENST00000498579 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
ECM1-207ENST00000498579 KRTAP12-4P60329 112 aa6.06□□□□□ -1.44
ECM1-207ENST00000498579 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
ECM1-207ENST00000498579 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
ECM1-207ENST00000498579 A6NED7 52 aa6□□□□□ -1.45
ECM1-207ENST00000498579 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
ECM1-207ENST00000498579 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
ECM1-207ENST00000498579 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
ECM1-207ENST00000498579 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
ECM1-207ENST00000498579 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
ECM1-207ENST00000498579 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.47
ECM1-207ENST00000498579 ROMO1P60602 79 aa5.83□□□□□ -1.48
ECM1-207ENST00000498579 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
ECM1-207ENST00000498579 MT1AP04731 61 aa5.71□□□□□ -1.5
ECM1-207ENST00000498579 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
ECM1-207ENST00000498579 KRTAP5-2Q701N4 177 aa5.6□□□□□ -1.51
ECM1-207ENST00000498579 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
ECM1-207ENST00000498579 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
ECM1-207ENST00000498579 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
ECM1-207ENST00000498579 PCP4P48539 62 aa5.51□□□□□ -1.53
ECM1-207ENST00000498579 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
ECM1-207ENST00000498579 KRTAP5-8O75690 187 aa5.34□□□□□ -1.55
ECM1-207ENST00000498579 OBSCNQ5VST9 7968 aa5.27□□□□□ -1.57
ECM1-207ENST00000498579 MT3P25713 68 aa5.26□□□□□ -1.57
ECM1-207ENST00000498579 H3BS24 57 aa5.16□□□□□ -1.58
ECM1-207ENST00000498579 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.59
ECM1-207ENST00000498579 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
ECM1-207ENST00000498579 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
ECM1-207ENST00000498579 AHNAKQ09666 5890 aaKnown RBP5.11□□□□□ -1.59
ECM1-207ENST00000498579 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
ECM1-207ENST00000498579 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
ECM1-207ENST00000498579 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
ECM1-207ENST00000498579 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
ECM1-207ENST00000498579 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
ECM1-207ENST00000498579 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
ECM1-207ENST00000498579 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
ECM1-207ENST00000498579 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
ECM1-207ENST00000498579 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
ECM1-207ENST00000498579 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
ECM1-207ENST00000498579 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
ECM1-207ENST00000498579 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
ECM1-207ENST00000498579 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
ECM1-207ENST00000498579 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
ECM1-207ENST00000498579 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
ECM1-207ENST00000498579 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
ECM1-207ENST00000498579 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
ECM1-207ENST00000498579 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
ECM1-207ENST00000498579 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
ECM1-207ENST00000498579 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
ECM1-207ENST00000498579 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
ECM1-207ENST00000498579 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
ECM1-207ENST00000498579 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
ECM1-207ENST00000498579 PRM1P04553 51 aa2.95□□□□□ -1.94
ECM1-207ENST00000498579 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
ECM1-207ENST00000498579 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
ECM1-207ENST00000498579 INE1O15225 51 aa2.4□□□□□ -2.03
ECM1-207ENST00000498579 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 25.8 ms