RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
CCDC58-207ENST00000498466 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
CCDC58-207ENST00000498466 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
CCDC58-207ENST00000498466 KRTAP12-1P59990 96 aa4.65□□□□□ -1.67
CCDC58-207ENST00000498466 SEC61GP60059 68 aa4.63□□□□□ -1.67
CCDC58-207ENST00000498466 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
CCDC58-207ENST00000498466 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
CCDC58-207ENST00000498466 PCP4P48539 62 aa4.61□□□□□ -1.67
CCDC58-207ENST00000498466 SNURFQ9Y675 71 aa4.61□□□□□ -1.67
CCDC58-207ENST00000498466 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
CCDC58-207ENST00000498466 SMIM20Q8N5G0 67 aa4.6□□□□□ -1.67
CCDC58-207ENST00000498466 SPANXA2-OT1Q8N9U9 137 aa4.59□□□□□ -1.67
CCDC58-207ENST00000498466 A0A1B0GU33 70 aa4.57□□□□□ -1.68
CCDC58-207ENST00000498466 TNP1P09430 55 aa4.57□□□□□ -1.68
CCDC58-207ENST00000498466 J3QR89 54 aa4.56□□□□□ -1.68
CCDC58-207ENST00000498466 MT3P25713 68 aa4.55□□□□□ -1.68
CCDC58-207ENST00000498466 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
CCDC58-207ENST00000498466 COA5Q86WW8 74 aa4.51□□□□□ -1.69
CCDC58-207ENST00000498466 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
CCDC58-207ENST00000498466 A0A1B0GV90 55 aa4.48□□□□□ -1.69
CCDC58-207ENST00000498466 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
CCDC58-207ENST00000498466 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
CCDC58-207ENST00000498466 A8MU10 97 aa4.42□□□□□ -1.7
CCDC58-207ENST00000498466 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
CCDC58-207ENST00000498466 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
CCDC58-207ENST00000498466 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
CCDC58-207ENST00000498466 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
CCDC58-207ENST00000498466 A0A1B0GU69 56 aa4.3□□□□□ -1.72
CCDC58-207ENST00000498466 SERP2Q8N6R1 65 aa4.3□□□□□ -1.72
CCDC58-207ENST00000498466 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
CCDC58-207ENST00000498466 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
CCDC58-207ENST00000498466 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
CCDC58-207ENST00000498466 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
CCDC58-207ENST00000498466 K7ERU9 68 aa4.17□□□□□ -1.74
CCDC58-207ENST00000498466 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
CCDC58-207ENST00000498466 MT1AP04731 61 aa4.16□□□□□ -1.74
CCDC58-207ENST00000498466 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
CCDC58-207ENST00000498466 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
CCDC58-207ENST00000498466 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
CCDC58-207ENST00000498466 H7BZZ5 65 aa4.08□□□□□ -1.76
CCDC58-207ENST00000498466 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
CCDC58-207ENST00000498466 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
CCDC58-207ENST00000498466 COX7CP15954 63 aa4.04□□□□□ -1.76
CCDC58-207ENST00000498466 UQCR11O14957 56 aa3.89□□□□□ -1.79
CCDC58-207ENST00000498466 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
CCDC58-207ENST00000498466 LINC01558Q9Y6Z2 57 aa3.87□□□□□ -1.79
CCDC58-207ENST00000498466 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
CCDC58-207ENST00000498466 K7ERS5 55 aa3.8□□□□□ -1.8
CCDC58-207ENST00000498466 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
CCDC58-207ENST00000498466 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
CCDC58-207ENST00000498466 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
CCDC58-207ENST00000498466 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
CCDC58-207ENST00000498466 ATP5EP56381 51 aaPredicted RBP3.7□□□□□ -1.82
CCDC58-207ENST00000498466 RPS28P62857 69 aaKnown RBP3.63□□□□□ -1.83
CCDC58-207ENST00000498466 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
CCDC58-207ENST00000498466 TMEM258P61165 79 aa3.53□□□□□ -1.84
CCDC58-207ENST00000498466 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
CCDC58-207ENST00000498466 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
CCDC58-207ENST00000498466 Q1T7F1 81 aa3.47□□□□□ -1.85
CCDC58-207ENST00000498466 PSPHP1O15172 72 aa3.45□□□□□ -1.86
CCDC58-207ENST00000498466 ROMO1P60602 79 aa3.43□□□□□ -1.86
CCDC58-207ENST00000498466 V9GYY9 64 aa3.36□□□□□ -1.87
CCDC58-207ENST00000498466 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
CCDC58-207ENST00000498466 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
CCDC58-207ENST00000498466 A6NED7 52 aa3.31□□□□□ -1.88
CCDC58-207ENST00000498466 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
CCDC58-207ENST00000498466 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
CCDC58-207ENST00000498466 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
CCDC58-207ENST00000498466 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
CCDC58-207ENST00000498466 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
CCDC58-207ENST00000498466 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
CCDC58-207ENST00000498466 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
CCDC58-207ENST00000498466 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
CCDC58-207ENST00000498466 KTN1-AS1Q86SY8 53 aa2.3□□□□□ -2.04
CCDC58-207ENST00000498466 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
CCDC58-207ENST00000498466 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
CCDC58-207ENST00000498466 PRM1P04553 51 aa1.74□□□□□ -2.13
CCDC58-207ENST00000498466 INE1O15225 51 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 101.5 ms