RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 HERC1Q15751 4861 aa2.09□□□□□ -2.07
SSR3-209ENST00000498205 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
SSR3-209ENST00000498205 CRIPTQ9P021 101 aa2.07□□□□□ -2.08
SSR3-209ENST00000498205 LRP2P98164 4655 aa2.04□□□□□ -2.08
SSR3-209ENST00000498205 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.08
SSR3-209ENST00000498205 A0A0D9SG42 100 aa2.02□□□□□ -2.09
SSR3-209ENST00000498205 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
SSR3-209ENST00000498205 LUZP6Q538Z0 58 aa2□□□□□ -2.09
SSR3-209ENST00000498205 R4GN34 69 aa2□□□□□ -2.09
SSR3-209ENST00000498205 FLGP20930 4061 aaPredicted RBP2□□□□□ -2.09
SSR3-209ENST00000498205 MUC17Q685J3 4493 aa1.98□□□□□ -2.09
SSR3-209ENST00000498205 KRTAP19-2Q3LHN2 52 aa1.98□□□□□ -2.09
SSR3-209ENST00000498205 LPAP08519 4548 aa1.95□□□□□ -2.1
SSR3-209ENST00000498205 C10orf95Q9H7T3 257 aa1.94□□□□□ -2.1
SSR3-209ENST00000498205 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
SSR3-209ENST00000498205 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
SSR3-209ENST00000498205 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
SSR3-209ENST00000498205 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
SSR3-209ENST00000498205 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
SSR3-209ENST00000498205 PLAC4Q8WY50 150 aa1.9□□□□□ -2.11
SSR3-209ENST00000498205 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.11
SSR3-209ENST00000498205 TNP1P09430 55 aa1.89□□□□□ -2.11
SSR3-209ENST00000498205 SPRR2GQ9BYE4 73 aa1.88□□□□□ -2.11
SSR3-209ENST00000498205 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
SSR3-209ENST00000498205 HMCN2Q8NDA2 5059 aa1.82□□□□□ -2.12
SSR3-209ENST00000498205 KRTAP19-8Q3LI54 63 aa1.8□□□□□ -2.12
SSR3-209ENST00000498205 NEBP20929 6669 aa1.78□□□□□ -2.12
SSR3-209ENST00000498205 KRTAP8-1Q8IUC2 63 aa1.78□□□□□ -2.12
SSR3-209ENST00000498205 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
SSR3-209ENST00000498205 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
SSR3-209ENST00000498205 MT1HP80294 61 aa1.75□□□□□ -2.13
SSR3-209ENST00000498205 MT2AP02795 61 aa1.74□□□□□ -2.13
SSR3-209ENST00000498205 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
SSR3-209ENST00000498205 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
SSR3-209ENST00000498205 MT1FP04733 61 aa1.71□□□□□ -2.14
SSR3-209ENST00000498205 M0R2T5 61 aa1.7□□□□□ -2.14
SSR3-209ENST00000498205 MT1BP07438 61 aa1.7□□□□□ -2.14
SSR3-209ENST00000498205 PRO2289Q9P1D8 64 aa1.7□□□□□ -2.14
SSR3-209ENST00000498205 MT1XP80297 61 aa1.69□□□□□ -2.14
SSR3-209ENST00000498205 INE1O15225 51 aa1.68□□□□□ -2.14
SSR3-209ENST00000498205 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
SSR3-209ENST00000498205 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
SSR3-209ENST00000498205 KRTAP19-5Q3LI72 72 aa1.54□□□□□ -2.16
SSR3-209ENST00000498205 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
SSR3-209ENST00000498205 KMT2DO14686 5537 aa1.54□□□□□ -2.16
SSR3-209ENST00000498205 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
SSR3-209ENST00000498205 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
SSR3-209ENST00000498205 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
SSR3-209ENST00000498205 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
SSR3-209ENST00000498205 KRTAP19-7Q3SYF9 63 aa1.51□□□□□ -2.17
SSR3-209ENST00000498205 FCGBPQ9Y6R7 5405 aaPredicted RBP1.51□□□□□ -2.17
SSR3-209ENST00000498205 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
SSR3-209ENST00000498205 MT1EP04732 61 aa1.48□□□□□ -2.17
SSR3-209ENST00000498205 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
SSR3-209ENST00000498205 MT1LQ93083 61 aa1.48□□□□□ -2.17
SSR3-209ENST00000498205 USH2AO75445 5202 aa1.46□□□□□ -2.18
SSR3-209ENST00000498205 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
SSR3-209ENST00000498205 MDN1Q9NU22 5596 aa1.42□□□□□ -2.18
SSR3-209ENST00000498205 MT1GP13640 62 aa1.42□□□□□ -2.18
SSR3-209ENST00000498205 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
SSR3-209ENST00000498205 MT1MQ8N339 61 aa1.37□□□□□ -2.19
SSR3-209ENST00000498205 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
SSR3-209ENST00000498205 MT1AP04731 61 aa1.33□□□□□ -2.2
SSR3-209ENST00000498205 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
SSR3-209ENST00000498205 SPRR2FQ96RM1 72 aa1.25□□□□□ -2.21
SSR3-209ENST00000498205 KRTAP6-1Q3LI64 71 aa1.2□□□□□ -2.22
SSR3-209ENST00000498205 SYNE1Q8NF91 8797 aaKnown RBP1.19□□□□□ -2.22
SSR3-209ENST00000498205 SPRR2AP35326 72 aa1.14□□□□□ -2.23
SSR3-209ENST00000498205 SPRR2EP22531 72 aa1.13□□□□□ -2.23
SSR3-209ENST00000498205 SPRR2BP35325 72 aa1.13□□□□□ -2.23
SSR3-209ENST00000498205 PRM1P04553 51 aa1.09□□□□□ -2.23
SSR3-209ENST00000498205 SPRR2DP22532 72 aa1.09□□□□□ -2.23
SSR3-209ENST00000498205 KRTAP6-2Q3LI66 62 aa1.08□□□□□ -2.24
SSR3-209ENST00000498205 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
SSR3-209ENST00000498205 MT4P47944 62 aa0.99□□□□□ -2.25
SSR3-209ENST00000498205 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
SSR3-209ENST00000498205 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
SSR3-209ENST00000498205 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 87.7 ms