RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
LMBR1-219ENST00000498034 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
LMBR1-219ENST00000498034 CCDC179H3BU77 68 aa6.94□□□□□ -1.3
LMBR1-219ENST00000498034 KRTAP4-6Q9BYQ5 205 aa6.91□□□□□ -1.3
LMBR1-219ENST00000498034 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
LMBR1-219ENST00000498034 LINC01558Q9Y6Z2 57 aa6.88□□□□□ -1.31
LMBR1-219ENST00000498034 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
LMBR1-219ENST00000498034 ATP5EP56381 51 aaPredicted RBP6.85□□□□□ -1.31
LMBR1-219ENST00000498034 KRTAP5-10Q6L8G5 202 aa6.77□□□□□ -1.33
LMBR1-219ENST00000498034 AHNAK2Q8IVF2 5795 aa6.76□□□□□ -1.33
LMBR1-219ENST00000498034 UQCR11O14957 56 aa6.74□□□□□ -1.33
LMBR1-219ENST00000498034 KRTAP5-5Q701N2 237 aaPredicted RBP6.64□□□□□ -1.35
LMBR1-219ENST00000498034 KRTAP20-2Q3LI61 65 aa6.62□□□□□ -1.35
LMBR1-219ENST00000498034 TMEM258P61165 79 aa6.61□□□□□ -1.35
LMBR1-219ENST00000498034 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
LMBR1-219ENST00000498034 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
LMBR1-219ENST00000498034 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
LMBR1-219ENST00000498034 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
LMBR1-219ENST00000498034 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
LMBR1-219ENST00000498034 KRTAP5-7Q6L8G8 165 aa6.52□□□□□ -1.37
LMBR1-219ENST00000498034 KRTAP12-4P60329 112 aa6.5□□□□□ -1.37
LMBR1-219ENST00000498034 K7ERS5 55 aa6.46□□□□□ -1.38
LMBR1-219ENST00000498034 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
LMBR1-219ENST00000498034 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
LMBR1-219ENST00000498034 PSPHP1O15172 72 aa6.37□□□□□ -1.39
LMBR1-219ENST00000498034 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
LMBR1-219ENST00000498034 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
LMBR1-219ENST00000498034 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
LMBR1-219ENST00000498034 V9GYY9 64 aa6.29□□□□□ -1.4
LMBR1-219ENST00000498034 Q1T7F1 81 aa6.26□□□□□ -1.41
LMBR1-219ENST00000498034 MT1AP04731 61 aa6.14□□□□□ -1.43
LMBR1-219ENST00000498034 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
LMBR1-219ENST00000498034 A6NED7 52 aa6.12□□□□□ -1.43
LMBR1-219ENST00000498034 CDC42SE1Q9NRR8 79 aa6.1□□□□□ -1.43
LMBR1-219ENST00000498034 KRTAP5-2Q701N4 177 aa6.09□□□□□ -1.43
LMBR1-219ENST00000498034 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
LMBR1-219ENST00000498034 ROMO1P60602 79 aa6□□□□□ -1.45
LMBR1-219ENST00000498034 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
LMBR1-219ENST00000498034 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
LMBR1-219ENST00000498034 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
LMBR1-219ENST00000498034 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
LMBR1-219ENST00000498034 KRTAP5-8O75690 187 aa5.88□□□□□ -1.47
LMBR1-219ENST00000498034 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
LMBR1-219ENST00000498034 MT3P25713 68 aa5.62□□□□□ -1.51
LMBR1-219ENST00000498034 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
LMBR1-219ENST00000498034 MUC5ACP98088 5654 aa5.58□□□□□ -1.52
LMBR1-219ENST00000498034 MUC5BQ9HC84 5762 aaPredicted RBP5.56□□□□□ -1.52
LMBR1-219ENST00000498034 AHNAKQ09666 5890 aaKnown RBP5.53□□□□□ -1.52
LMBR1-219ENST00000498034 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
LMBR1-219ENST00000498034 PCP4P48539 62 aa5.43□□□□□ -1.54
LMBR1-219ENST00000498034 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
LMBR1-219ENST00000498034 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
LMBR1-219ENST00000498034 BRK1Q8WUW1 75 aa5□□□□□ -1.61
LMBR1-219ENST00000498034 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
LMBR1-219ENST00000498034 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
LMBR1-219ENST00000498034 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
LMBR1-219ENST00000498034 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
LMBR1-219ENST00000498034 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
LMBR1-219ENST00000498034 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
LMBR1-219ENST00000498034 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
LMBR1-219ENST00000498034 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
LMBR1-219ENST00000498034 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
LMBR1-219ENST00000498034 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
LMBR1-219ENST00000498034 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
LMBR1-219ENST00000498034 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
LMBR1-219ENST00000498034 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
LMBR1-219ENST00000498034 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
LMBR1-219ENST00000498034 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
LMBR1-219ENST00000498034 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
LMBR1-219ENST00000498034 H3BS24 57 aa3.86□□□□□ -1.79
LMBR1-219ENST00000498034 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
LMBR1-219ENST00000498034 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
LMBR1-219ENST00000498034 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
LMBR1-219ENST00000498034 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
LMBR1-219ENST00000498034 PRM1P04553 51 aa3.08□□□□□ -1.92
LMBR1-219ENST00000498034 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
LMBR1-219ENST00000498034 INE1O15225 51 aa2.76□□□□□ -1.97
LMBR1-219ENST00000498034 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 106.4 ms