RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
ERCC8-208ENST00000497892 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
ERCC8-208ENST00000497892 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
ERCC8-208ENST00000497892 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
ERCC8-208ENST00000497892 A8MU10 97 aa4.39□□□□□ -1.71
ERCC8-208ENST00000497892 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
ERCC8-208ENST00000497892 SPRR2EP22531 72 aa4.35□□□□□ -1.71
ERCC8-208ENST00000497892 SPRR2BP35325 72 aa4.35□□□□□ -1.71
ERCC8-208ENST00000497892 SPRR2AP35326 72 aa4.35□□□□□ -1.71
ERCC8-208ENST00000497892 UQCR11O14957 56 aa4.3□□□□□ -1.72
ERCC8-208ENST00000497892 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
ERCC8-208ENST00000497892 V9GYY9 64 aa4.25□□□□□ -1.73
ERCC8-208ENST00000497892 Q1T7F1 81 aa4.24□□□□□ -1.73
ERCC8-208ENST00000497892 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
ERCC8-208ENST00000497892 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
ERCC8-208ENST00000497892 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
ERCC8-208ENST00000497892 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
ERCC8-208ENST00000497892 PSPHP1O15172 72 aa4.21□□□□□ -1.74
ERCC8-208ENST00000497892 SPRR2DP22532 72 aa4.21□□□□□ -1.74
ERCC8-208ENST00000497892 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
ERCC8-208ENST00000497892 MT1EP04732 61 aa4.18□□□□□ -1.74
ERCC8-208ENST00000497892 TNP1P09430 55 aa4.18□□□□□ -1.74
ERCC8-208ENST00000497892 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
ERCC8-208ENST00000497892 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
ERCC8-208ENST00000497892 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
ERCC8-208ENST00000497892 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
ERCC8-208ENST00000497892 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
ERCC8-208ENST00000497892 K7ERS5 55 aa4.1□□□□□ -1.75
ERCC8-208ENST00000497892 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
ERCC8-208ENST00000497892 A6NED7 52 aa4.08□□□□□ -1.76
ERCC8-208ENST00000497892 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
ERCC8-208ENST00000497892 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
ERCC8-208ENST00000497892 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
ERCC8-208ENST00000497892 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
ERCC8-208ENST00000497892 MT1GP13640 62 aa4.02□□□□□ -1.77
ERCC8-208ENST00000497892 MT1LQ93083 61 aa4.02□□□□□ -1.77
ERCC8-208ENST00000497892 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
ERCC8-208ENST00000497892 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
ERCC8-208ENST00000497892 MT1MQ8N339 61 aa3.97□□□□□ -1.77
ERCC8-208ENST00000497892 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
ERCC8-208ENST00000497892 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
ERCC8-208ENST00000497892 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
ERCC8-208ENST00000497892 ROMO1P60602 79 aa3.86□□□□□ -1.79
ERCC8-208ENST00000497892 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
ERCC8-208ENST00000497892 MT4P47944 62 aa3.66□□□□□ -1.82
ERCC8-208ENST00000497892 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
ERCC8-208ENST00000497892 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
ERCC8-208ENST00000497892 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
ERCC8-208ENST00000497892 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
ERCC8-208ENST00000497892 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
ERCC8-208ENST00000497892 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
ERCC8-208ENST00000497892 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
ERCC8-208ENST00000497892 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
ERCC8-208ENST00000497892 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
ERCC8-208ENST00000497892 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
ERCC8-208ENST00000497892 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
ERCC8-208ENST00000497892 MT1AP04731 61 aa3.42□□□□□ -1.86
ERCC8-208ENST00000497892 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
ERCC8-208ENST00000497892 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
ERCC8-208ENST00000497892 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
ERCC8-208ENST00000497892 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
ERCC8-208ENST00000497892 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
ERCC8-208ENST00000497892 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
ERCC8-208ENST00000497892 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
ERCC8-208ENST00000497892 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
ERCC8-208ENST00000497892 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
ERCC8-208ENST00000497892 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
ERCC8-208ENST00000497892 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
ERCC8-208ENST00000497892 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
ERCC8-208ENST00000497892 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
ERCC8-208ENST00000497892 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
ERCC8-208ENST00000497892 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
ERCC8-208ENST00000497892 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
ERCC8-208ENST00000497892 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
ERCC8-208ENST00000497892 PRM1P04553 51 aa1.98□□□□□ -2.09
ERCC8-208ENST00000497892 INE1O15225 51 aa1.89□□□□□ -2.11
ERCC8-208ENST00000497892 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
ERCC8-208ENST00000497892 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 121.2 ms