RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
NXF3-207ENST00000497850 KRTAP9-2Q9BYQ4 174 aa4.35□□□□□ -1.71
NXF3-207ENST00000497850 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
NXF3-207ENST00000497850 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
NXF3-207ENST00000497850 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
NXF3-207ENST00000497850 LCE2DQ5TA82 110 aaPredicted RBP4.29□□□□□ -1.72
NXF3-207ENST00000497850 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
NXF3-207ENST00000497850 MT1GP13640 62 aa4.23□□□□□ -1.73
NXF3-207ENST00000497850 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
NXF3-207ENST00000497850 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
NXF3-207ENST00000497850 MT1MQ8N339 61 aa4.19□□□□□ -1.74
NXF3-207ENST00000497850 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
NXF3-207ENST00000497850 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
NXF3-207ENST00000497850 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
NXF3-207ENST00000497850 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
NXF3-207ENST00000497850 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
NXF3-207ENST00000497850 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
NXF3-207ENST00000497850 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
NXF3-207ENST00000497850 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
NXF3-207ENST00000497850 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
NXF3-207ENST00000497850 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.79
NXF3-207ENST00000497850 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
NXF3-207ENST00000497850 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
NXF3-207ENST00000497850 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
NXF3-207ENST00000497850 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
NXF3-207ENST00000497850 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
NXF3-207ENST00000497850 SPRR2EP22531 72 aa3.77□□□□□ -1.81
NXF3-207ENST00000497850 SPRR2BP35325 72 aa3.77□□□□□ -1.81
NXF3-207ENST00000497850 SPRR2AP35326 72 aa3.77□□□□□ -1.81
NXF3-207ENST00000497850 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
NXF3-207ENST00000497850 PRM1P04553 51 aa3.73□□□□□ -1.81
NXF3-207ENST00000497850 MT1AP04731 61 aa3.72□□□□□ -1.81
NXF3-207ENST00000497850 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
NXF3-207ENST00000497850 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
NXF3-207ENST00000497850 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
NXF3-207ENST00000497850 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
NXF3-207ENST00000497850 SPRR2DP22532 72 aa3.6□□□□□ -1.83
NXF3-207ENST00000497850 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
NXF3-207ENST00000497850 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
NXF3-207ENST00000497850 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
NXF3-207ENST00000497850 NEBP20929 6669 aa3.47□□□□□ -1.85
NXF3-207ENST00000497850 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
NXF3-207ENST00000497850 MT3P25713 68 aa3.34□□□□□ -1.87
NXF3-207ENST00000497850 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
NXF3-207ENST00000497850 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
NXF3-207ENST00000497850 MT4P47944 62 aa3.23□□□□□ -1.89
NXF3-207ENST00000497850 KRTAP4-6Q9BYQ5 205 aa3.23□□□□□ -1.89
NXF3-207ENST00000497850 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
NXF3-207ENST00000497850 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
NXF3-207ENST00000497850 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
NXF3-207ENST00000497850 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
NXF3-207ENST00000497850 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
NXF3-207ENST00000497850 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
NXF3-207ENST00000497850 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
NXF3-207ENST00000497850 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
NXF3-207ENST00000497850 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
NXF3-207ENST00000497850 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
NXF3-207ENST00000497850 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
NXF3-207ENST00000497850 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
NXF3-207ENST00000497850 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
NXF3-207ENST00000497850 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
NXF3-207ENST00000497850 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
NXF3-207ENST00000497850 LCE1CQ5T751 118 aa2.57□□□□□ -2
NXF3-207ENST00000497850 LCE1FQ5T754 118 aa2.54□□□□□ -2
NXF3-207ENST00000497850 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
NXF3-207ENST00000497850 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
NXF3-207ENST00000497850 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
NXF3-207ENST00000497850 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
NXF3-207ENST00000497850 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
NXF3-207ENST00000497850 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
NXF3-207ENST00000497850 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
NXF3-207ENST00000497850 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
NXF3-207ENST00000497850 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
NXF3-207ENST00000497850 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
NXF3-207ENST00000497850 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
NXF3-207ENST00000497850 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
NXF3-207ENST00000497850 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
NXF3-207ENST00000497850 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 36.8 ms