RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
TRAPPC12-223ENST00000497597 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
TRAPPC12-223ENST00000497597 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
TRAPPC12-223ENST00000497597 LOC100996750A0A140TA64 210 aa3.57□□□□□ -1.84
TRAPPC12-223ENST00000497597 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
TRAPPC12-223ENST00000497597 MT1GP13640 62 aa3.52□□□□□ -1.85
TRAPPC12-223ENST00000497597 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
TRAPPC12-223ENST00000497597 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
TRAPPC12-223ENST00000497597 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
TRAPPC12-223ENST00000497597 MT1LQ93083 61 aa3.47□□□□□ -1.85
TRAPPC12-223ENST00000497597 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
TRAPPC12-223ENST00000497597 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
TRAPPC12-223ENST00000497597 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
TRAPPC12-223ENST00000497597 LCE3BQ5TA77 95 aa3.43□□□□□ -1.86
TRAPPC12-223ENST00000497597 MT1EP04732 61 aa3.4□□□□□ -1.87
TRAPPC12-223ENST00000497597 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
TRAPPC12-223ENST00000497597 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
TRAPPC12-223ENST00000497597 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC12-223ENST00000497597 PRM1P04553 51 aa3.25□□□□□ -1.89
TRAPPC12-223ENST00000497597 MT1MQ8N339 61 aa3.19□□□□□ -1.9
TRAPPC12-223ENST00000497597 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
TRAPPC12-223ENST00000497597 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
TRAPPC12-223ENST00000497597 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
TRAPPC12-223ENST00000497597 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
TRAPPC12-223ENST00000497597 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
TRAPPC12-223ENST00000497597 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
TRAPPC12-223ENST00000497597 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
TRAPPC12-223ENST00000497597 MACF1Q9UPN3 7388 aaKnown RBP3.1□□□□□ -1.91
TRAPPC12-223ENST00000497597 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
TRAPPC12-223ENST00000497597 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC12-223ENST00000497597 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
TRAPPC12-223ENST00000497597 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
TRAPPC12-223ENST00000497597 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
TRAPPC12-223ENST00000497597 NEBP20929 6669 aa2.94□□□□□ -1.94
TRAPPC12-223ENST00000497597 MT1AP04731 61 aa2.89□□□□□ -1.95
TRAPPC12-223ENST00000497597 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
TRAPPC12-223ENST00000497597 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
TRAPPC12-223ENST00000497597 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
TRAPPC12-223ENST00000497597 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
TRAPPC12-223ENST00000497597 SPRR2EP22531 72 aa2.78□□□□□ -1.96
TRAPPC12-223ENST00000497597 SPRR2BP35325 72 aa2.78□□□□□ -1.96
TRAPPC12-223ENST00000497597 SPRR2AP35326 72 aa2.78□□□□□ -1.96
TRAPPC12-223ENST00000497597 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
TRAPPC12-223ENST00000497597 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
TRAPPC12-223ENST00000497597 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
TRAPPC12-223ENST00000497597 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
TRAPPC12-223ENST00000497597 SPRR2DP22532 72 aa2.69□□□□□ -1.98
TRAPPC12-223ENST00000497597 MT3P25713 68 aa2.64□□□□□ -1.99
TRAPPC12-223ENST00000497597 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
TRAPPC12-223ENST00000497597 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
TRAPPC12-223ENST00000497597 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
TRAPPC12-223ENST00000497597 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
TRAPPC12-223ENST00000497597 MT4P47944 62 aa2.46□□□□□ -2.02
TRAPPC12-223ENST00000497597 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
TRAPPC12-223ENST00000497597 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
TRAPPC12-223ENST00000497597 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
TRAPPC12-223ENST00000497597 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
TRAPPC12-223ENST00000497597 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
TRAPPC12-223ENST00000497597 KRTAP4-6Q9BYQ5 205 aa2.32□□□□□ -2.04
TRAPPC12-223ENST00000497597 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
TRAPPC12-223ENST00000497597 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
TRAPPC12-223ENST00000497597 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
TRAPPC12-223ENST00000497597 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
TRAPPC12-223ENST00000497597 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC12-223ENST00000497597 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
TRAPPC12-223ENST00000497597 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
TRAPPC12-223ENST00000497597 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.08
TRAPPC12-223ENST00000497597 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
TRAPPC12-223ENST00000497597 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
TRAPPC12-223ENST00000497597 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
TRAPPC12-223ENST00000497597 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
TRAPPC12-223ENST00000497597 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
TRAPPC12-223ENST00000497597 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
TRAPPC12-223ENST00000497597 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
TRAPPC12-223ENST00000497597 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC12-223ENST00000497597 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
TRAPPC12-223ENST00000497597 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
TRAPPC12-223ENST00000497597 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms