RNA–Protein interactions for RNA: ENST00000497409.1

ZNF561-221, Transcript of zinc finger protein 561, humanhuman

TSL 2

Gene ZNF561, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-221ENST00000497409 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
ZNF561-221ENST00000497409 UQCR11O14957 56 aa2.57□□□□□ -2
ZNF561-221ENST00000497409 MT2AP02795 61 aa2.57□□□□□ -2
ZNF561-221ENST00000497409 M0QZ58 72 aa2.55□□□□□ -2
ZNF561-221ENST00000497409 MT1FP04733 61 aa2.55□□□□□ -2
ZNF561-221ENST00000497409 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
ZNF561-221ENST00000497409 CRIPTQ9P021 101 aa2.55□□□□□ -2
ZNF561-221ENST00000497409 MIR22HGQ0VDD5 57 aa2.54□□□□□ -2
ZNF561-221ENST00000497409 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
ZNF561-221ENST00000497409 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
ZNF561-221ENST00000497409 CDC42SE1Q9NRR8 79 aa2.52□□□□□ -2.01
ZNF561-221ENST00000497409 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
ZNF561-221ENST00000497409 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
ZNF561-221ENST00000497409 BRK1Q8WUW1 75 aa2.5□□□□□ -2.01
ZNF561-221ENST00000497409 A0A0D9SG42 100 aa2.49□□□□□ -2.01
ZNF561-221ENST00000497409 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
ZNF561-221ENST00000497409 LINC01554Q52M75 96 aa2.48□□□□□ -2.01
ZNF561-221ENST00000497409 A6NN06 94 aa2.47□□□□□ -2.01
ZNF561-221ENST00000497409 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.02
ZNF561-221ENST00000497409 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
ZNF561-221ENST00000497409 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
ZNF561-221ENST00000497409 MT1BP07438 61 aa2.42□□□□□ -2.02
ZNF561-221ENST00000497409 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
ZNF561-221ENST00000497409 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
ZNF561-221ENST00000497409 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
ZNF561-221ENST00000497409 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
ZNF561-221ENST00000497409 USH2AO75445 5202 aa2.41□□□□□ -2.02
ZNF561-221ENST00000497409 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
ZNF561-221ENST00000497409 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
ZNF561-221ENST00000497409 ROMO1P60602 79 aa2.33□□□□□ -2.04
ZNF561-221ENST00000497409 MT1XP80297 61 aa2.33□□□□□ -2.04
ZNF561-221ENST00000497409 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
ZNF561-221ENST00000497409 KRTAP19-6Q3LI70 58 aa2.29□□□□□ -2.04
ZNF561-221ENST00000497409 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
ZNF561-221ENST00000497409 KMT2DO14686 5537 aa2.27□□□□□ -2.05
ZNF561-221ENST00000497409 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
ZNF561-221ENST00000497409 TNP1P09430 55 aa2.26□□□□□ -2.05
ZNF561-221ENST00000497409 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
ZNF561-221ENST00000497409 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
ZNF561-221ENST00000497409 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
ZNF561-221ENST00000497409 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
ZNF561-221ENST00000497409 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
ZNF561-221ENST00000497409 KRTAP8-1Q8IUC2 63 aa2.13□□□□□ -2.07
ZNF561-221ENST00000497409 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
ZNF561-221ENST00000497409 KRTAP19-7Q3SYF9 63 aa2.08□□□□□ -2.08
ZNF561-221ENST00000497409 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
ZNF561-221ENST00000497409 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
ZNF561-221ENST00000497409 KRTAP2-1Q9BYU5 128 aa2.06□□□□□ -2.08
ZNF561-221ENST00000497409 MT1EP04732 61 aa2.05□□□□□ -2.08
ZNF561-221ENST00000497409 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
ZNF561-221ENST00000497409 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
ZNF561-221ENST00000497409 SPRR2FQ96RM1 72 aa2.02□□□□□ -2.09
ZNF561-221ENST00000497409 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
ZNF561-221ENST00000497409 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
ZNF561-221ENST00000497409 MT1LQ93083 61 aa2□□□□□ -2.09
ZNF561-221ENST00000497409 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
ZNF561-221ENST00000497409 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
ZNF561-221ENST00000497409 MT1GP13640 62 aa1.94□□□□□ -2.1
ZNF561-221ENST00000497409 SPRR2EP22531 72 aa1.93□□□□□ -2.1
ZNF561-221ENST00000497409 SPRR2BP35325 72 aa1.93□□□□□ -2.1
ZNF561-221ENST00000497409 SPRR2AP35326 72 aa1.93□□□□□ -2.1
ZNF561-221ENST00000497409 MT1MQ8N339 61 aa1.93□□□□□ -2.1
ZNF561-221ENST00000497409 INE1O15225 51 aa1.92□□□□□ -2.1
ZNF561-221ENST00000497409 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
ZNF561-221ENST00000497409 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.1
ZNF561-221ENST00000497409 SPRR2DP22532 72 aa1.86□□□□□ -2.11
ZNF561-221ENST00000497409 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
ZNF561-221ENST00000497409 MT1AP04731 61 aa1.7□□□□□ -2.14
ZNF561-221ENST00000497409 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
ZNF561-221ENST00000497409 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
ZNF561-221ENST00000497409 MT4P47944 62 aa1.6□□□□□ -2.15
ZNF561-221ENST00000497409 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
ZNF561-221ENST00000497409 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
ZNF561-221ENST00000497409 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
ZNF561-221ENST00000497409 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
ZNF561-221ENST00000497409 PRM1P04553 51 aa1.2□□□□□ -2.22
ZNF561-221ENST00000497409 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
ZNF561-221ENST00000497409 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 31.2 ms