RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 KRTAP25-1Q3LHN0 102 aa1.37□□□□□ -2.19
SHTN1-206ENST00000497044 KRTAP5-5Q701N2 237 aaPredicted RBP1.37□□□□□ -2.19
SHTN1-206ENST00000497044 ACYP2P14621 99 aa1.36□□□□□ -2.19
SHTN1-206ENST00000497044 LINC01554Q52M75 96 aa1.36□□□□□ -2.19
SHTN1-206ENST00000497044 BRK1Q8WUW1 75 aa1.36□□□□□ -2.19
SHTN1-206ENST00000497044 ROMO1P60602 79 aa1.35□□□□□ -2.19
SHTN1-206ENST00000497044 CAMK2N1Q7Z7J9 78 aa1.35□□□□□ -2.19
SHTN1-206ENST00000497044 PSPHP1O15172 72 aa1.34□□□□□ -2.19
SHTN1-206ENST00000497044 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.19
SHTN1-206ENST00000497044 PRO2289Q9P1D8 64 aa1.34□□□□□ -2.19
SHTN1-206ENST00000497044 SPRR2EP22531 72 aa1.33□□□□□ -2.2
SHTN1-206ENST00000497044 SPRR2BP35325 72 aa1.33□□□□□ -2.2
SHTN1-206ENST00000497044 SPRR2AP35326 72 aa1.33□□□□□ -2.2
SHTN1-206ENST00000497044 CHKB-CPT1BH3BT56 60 aa1.32□□□□□ -2.2
SHTN1-206ENST00000497044 M0QZ58 72 aa1.32□□□□□ -2.2
SHTN1-206ENST00000497044 PLAC4Q8WY50 150 aa1.32□□□□□ -2.2
SHTN1-206ENST00000497044 SPRR2DP22532 72 aa1.32□□□□□ -2.2
SHTN1-206ENST00000497044 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
SHTN1-206ENST00000497044 MACF1Q9UPN3 7388 aaKnown RBP1.31□□□□□ -2.2
SHTN1-206ENST00000497044 R4GN34 69 aa1.31□□□□□ -2.2
SHTN1-206ENST00000497044 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
SHTN1-206ENST00000497044 PRR15LQ9BU68 103 aa1.3□□□□□ -2.2
SHTN1-206ENST00000497044 KMT2DO14686 5537 aa1.29□□□□□ -2.2
SHTN1-206ENST00000497044 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
SHTN1-206ENST00000497044 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
SHTN1-206ENST00000497044 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
SHTN1-206ENST00000497044 FSIP2Q5CZC0 6907 aa1.28□□□□□ -2.2
SHTN1-206ENST00000497044 UQCR11O14957 56 aa1.26□□□□□ -2.21
SHTN1-206ENST00000497044 MIR22HGQ0VDD5 57 aa1.26□□□□□ -2.21
SHTN1-206ENST00000497044 KRTAP8-1Q8IUC2 63 aa1.26□□□□□ -2.21
SHTN1-206ENST00000497044 SYNE2Q8WXH0 6885 aaKnown RBP1.25□□□□□ -2.21
SHTN1-206ENST00000497044 LCE3DQ9BYE3 92 aa1.25□□□□□ -2.21
SHTN1-206ENST00000497044 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
SHTN1-206ENST00000497044 MT1XP80297 61 aa1.24□□□□□ -2.21
SHTN1-206ENST00000497044 K7ERS5 55 aa1.23□□□□□ -2.21
SHTN1-206ENST00000497044 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
SHTN1-206ENST00000497044 A0A1B0GU33 70 aa1.22□□□□□ -2.21
SHTN1-206ENST00000497044 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
SHTN1-206ENST00000497044 A0A1B0GU69 56 aa1.21□□□□□ -2.22
SHTN1-206ENST00000497044 A6NED7 52 aa1.21□□□□□ -2.22
SHTN1-206ENST00000497044 MDN1Q9NU22 5596 aa1.21□□□□□ -2.22
SHTN1-206ENST00000497044 MT1GP13640 62 aa1.18□□□□□ -2.22
SHTN1-206ENST00000497044 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
SHTN1-206ENST00000497044 MUC12Q9UKN1 5478 aa1.17□□□□□ -2.22
SHTN1-206ENST00000497044 KRTAP4-4Q9BYR3 166 aa1.16□□□□□ -2.22
SHTN1-206ENST00000497044 SPINT4Q6UDR6 99 aa1.16□□□□□ -2.22
SHTN1-206ENST00000497044 TNP1P09430 55 aa1.15□□□□□ -2.22
SHTN1-206ENST00000497044 PP632Q6XCG6 107 aa1.15□□□□□ -2.23
SHTN1-206ENST00000497044 A0A0D9SG42 100 aa1.14□□□□□ -2.23
SHTN1-206ENST00000497044 LUZP6Q538Z0 58 aa1.14□□□□□ -2.23
SHTN1-206ENST00000497044 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
SHTN1-206ENST00000497044 MT1EP04732 61 aa1.14□□□□□ -2.23
SHTN1-206ENST00000497044 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
SHTN1-206ENST00000497044 KRTAP5-2Q701N4 177 aa1.12□□□□□ -2.23
SHTN1-206ENST00000497044 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
SHTN1-206ENST00000497044 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
SHTN1-206ENST00000497044 MT1MQ8N339 61 aa1.1□□□□□ -2.23
SHTN1-206ENST00000497044 LCE1CQ5T751 118 aa1.09□□□□□ -2.23
SHTN1-206ENST00000497044 LCE1BQ5T7P3 118 aa1.09□□□□□ -2.23
SHTN1-206ENST00000497044 LCE3AQ5TA76 89 aa1.07□□□□□ -2.24
SHTN1-206ENST00000497044 MT1LQ93083 61 aa1.07□□□□□ -2.24
SHTN1-206ENST00000497044 KRTAP12-3P60328 96 aa1.06□□□□□ -2.24
SHTN1-206ENST00000497044 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
SHTN1-206ENST00000497044 MUC19Q7Z5P9 8384 aa1.04□□□□□ -2.24
SHTN1-206ENST00000497044 KRTAP12-4P60329 112 aa1.04□□□□□ -2.24
SHTN1-206ENST00000497044 INE1O15225 51 aa1.04□□□□□ -2.24
SHTN1-206ENST00000497044 MT4P47944 62 aa1□□□□□ -2.25
SHTN1-206ENST00000497044 KRTAP4-3Q9BYR4 195 aa1□□□□□ -2.25
SHTN1-206ENST00000497044 MT1AP04731 61 aa0.96□□□□□ -2.26
SHTN1-206ENST00000497044 KRTAP6-1Q3LI64 71 aa0.87□□□□□ -2.27
SHTN1-206ENST00000497044 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
SHTN1-206ENST00000497044 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
SHTN1-206ENST00000497044 KRTAP6-2Q3LI66 62 aa0.83□□□□□ -2.28
SHTN1-206ENST00000497044 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
SHTN1-206ENST00000497044 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
SHTN1-206ENST00000497044 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
SHTN1-206ENST00000497044 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
SHTN1-206ENST00000497044 PRM1P04553 51 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms