RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
GCOM1-212ENST00000496627 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
GCOM1-212ENST00000496627 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
GCOM1-212ENST00000496627 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
GCOM1-212ENST00000496627 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
GCOM1-212ENST00000496627 MT1MQ8N339 61 aa4.79□□□□□ -1.64
GCOM1-212ENST00000496627 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
GCOM1-212ENST00000496627 MT1GP13640 62 aa4.78□□□□□ -1.64
GCOM1-212ENST00000496627 MUC12Q9UKN1 5478 aa4.75□□□□□ -1.65
GCOM1-212ENST00000496627 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
GCOM1-212ENST00000496627 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.67
GCOM1-212ENST00000496627 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
GCOM1-212ENST00000496627 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
GCOM1-212ENST00000496627 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
GCOM1-212ENST00000496627 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
GCOM1-212ENST00000496627 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
GCOM1-212ENST00000496627 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.72
GCOM1-212ENST00000496627 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
GCOM1-212ENST00000496627 MT1AP04731 61 aa4.31□□□□□ -1.72
GCOM1-212ENST00000496627 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
GCOM1-212ENST00000496627 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
GCOM1-212ENST00000496627 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
GCOM1-212ENST00000496627 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
GCOM1-212ENST00000496627 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
GCOM1-212ENST00000496627 SPRR2EP22531 72 aa4.24□□□□□ -1.73
GCOM1-212ENST00000496627 SPRR2BP35325 72 aa4.24□□□□□ -1.73
GCOM1-212ENST00000496627 SPRR2AP35326 72 aa4.24□□□□□ -1.73
GCOM1-212ENST00000496627 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
GCOM1-212ENST00000496627 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
GCOM1-212ENST00000496627 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
GCOM1-212ENST00000496627 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
GCOM1-212ENST00000496627 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
GCOM1-212ENST00000496627 SPRR2DP22532 72 aa4.05□□□□□ -1.76
GCOM1-212ENST00000496627 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
GCOM1-212ENST00000496627 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
GCOM1-212ENST00000496627 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
GCOM1-212ENST00000496627 PRM1P04553 51 aa3.91□□□□□ -1.78
GCOM1-212ENST00000496627 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
GCOM1-212ENST00000496627 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
GCOM1-212ENST00000496627 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
GCOM1-212ENST00000496627 MT3P25713 68 aa3.88□□□□□ -1.79
GCOM1-212ENST00000496627 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
GCOM1-212ENST00000496627 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
GCOM1-212ENST00000496627 NEBP20929 6669 aa3.6□□□□□ -1.83
GCOM1-212ENST00000496627 MT4P47944 62 aa3.56□□□□□ -1.84
GCOM1-212ENST00000496627 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
GCOM1-212ENST00000496627 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
GCOM1-212ENST00000496627 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
GCOM1-212ENST00000496627 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
GCOM1-212ENST00000496627 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
GCOM1-212ENST00000496627 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
GCOM1-212ENST00000496627 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
GCOM1-212ENST00000496627 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
GCOM1-212ENST00000496627 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
GCOM1-212ENST00000496627 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
GCOM1-212ENST00000496627 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
GCOM1-212ENST00000496627 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
GCOM1-212ENST00000496627 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
GCOM1-212ENST00000496627 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
GCOM1-212ENST00000496627 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
GCOM1-212ENST00000496627 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
GCOM1-212ENST00000496627 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
GCOM1-212ENST00000496627 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
GCOM1-212ENST00000496627 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
GCOM1-212ENST00000496627 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
GCOM1-212ENST00000496627 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
GCOM1-212ENST00000496627 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
GCOM1-212ENST00000496627 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
GCOM1-212ENST00000496627 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
GCOM1-212ENST00000496627 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
GCOM1-212ENST00000496627 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
GCOM1-212ENST00000496627 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
GCOM1-212ENST00000496627 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
GCOM1-212ENST00000496627 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
GCOM1-212ENST00000496627 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
GCOM1-212ENST00000496627 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
GCOM1-212ENST00000496627 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
GCOM1-212ENST00000496627 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 38 ms