RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 RPS28P62857 69 aaKnown RBP8.28□□□□□ -1.08
CHRD-217ENST00000496527 A6NED7 52 aa8.22□□□□□ -1.09
CHRD-217ENST00000496527 MT1GP13640 62 aa8.17□□□□□ -1.1
CHRD-217ENST00000496527 KRTAP25-1Q3LHN0 102 aa8.13□□□□□ -1.11
CHRD-217ENST00000496527 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
CHRD-217ENST00000496527 MT1LQ93083 61 aa8.1□□□□□ -1.11
CHRD-217ENST00000496527 KRTAP12-3P60328 96 aa8.02□□□□□ -1.13
CHRD-217ENST00000496527 MT1MQ8N339 61 aa8.01□□□□□ -1.13
CHRD-217ENST00000496527 DSTQ03001 7570 aaKnown RBP7.92□□□□□ -1.14
CHRD-217ENST00000496527 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.14
CHRD-217ENST00000496527 KRTAP23-1A1A580 65 aa7.83□□□□□ -1.16
CHRD-217ENST00000496527 KRTAP4-3Q9BYR4 195 aa7.8□□□□□ -1.16
CHRD-217ENST00000496527 ROMO1P60602 79 aa7.78□□□□□ -1.16
CHRD-217ENST00000496527 KRTAP4-7Q9BYR0 210 aa7.71□□□□□ -1.18
CHRD-217ENST00000496527 KRTAP4-9Q9BYQ8 210 aa7.66□□□□□ -1.18
CHRD-217ENST00000496527 KRTAP19-4Q3LI73 84 aa7.6□□□□□ -1.19
CHRD-217ENST00000496527 LCE4AQ5TA78 99 aa7.59□□□□□ -1.19
CHRD-217ENST00000496527 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
CHRD-217ENST00000496527 LCE1DQ5T752 114 aa7.5□□□□□ -1.21
CHRD-217ENST00000496527 MT4P47944 62 aa7.47□□□□□ -1.21
CHRD-217ENST00000496527 KRTAP5-4Q6L8H1 288 aa7.47□□□□□ -1.21
CHRD-217ENST00000496527 LCE3CQ5T5A8 94 aa7.41□□□□□ -1.22
CHRD-217ENST00000496527 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
CHRD-217ENST00000496527 LOC100996750A0A140TA64 210 aa7.3□□□□□ -1.24
CHRD-217ENST00000496527 KRTAP5-5Q701N2 237 aaPredicted RBP7.3□□□□□ -1.24
CHRD-217ENST00000496527 HMCN1Q96RW7 5635 aa7.28□□□□□ -1.24
CHRD-217ENST00000496527 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
CHRD-217ENST00000496527 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
CHRD-217ENST00000496527 GPR98Q8WXG9 6306 aa7.07□□□□□ -1.28
CHRD-217ENST00000496527 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
CHRD-217ENST00000496527 KRTAP20-2Q3LI61 65 aa7.05□□□□□ -1.28
CHRD-217ENST00000496527 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
CHRD-217ENST00000496527 SYNE1Q8NF91 8797 aaKnown RBP6.94□□□□□ -1.3
CHRD-217ENST00000496527 MT1AP04731 61 aa6.91□□□□□ -1.3
CHRD-217ENST00000496527 AHNAK2Q8IVF2 5795 aa6.9□□□□□ -1.3
CHRD-217ENST00000496527 PMAIP1Q13794 54 aa6.9□□□□□ -1.3
CHRD-217ENST00000496527 KRTAP6-1Q3LI64 71 aa6.84□□□□□ -1.31
CHRD-217ENST00000496527 KRTAP5-10Q6L8G5 202 aa6.82□□□□□ -1.32
CHRD-217ENST00000496527 KRTAP5-3Q6L8H2 238 aa6.81□□□□□ -1.32
CHRD-217ENST00000496527 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
CHRD-217ENST00000496527 KRTAP5-2Q701N4 177 aa6.59□□□□□ -1.35
CHRD-217ENST00000496527 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
CHRD-217ENST00000496527 PRO0628Q9UI54 55 aa6.56□□□□□ -1.36
CHRD-217ENST00000496527 KRTAP5-7Q6L8G8 165 aa6.53□□□□□ -1.36
CHRD-217ENST00000496527 KRTAP6-2Q3LI66 62 aa6.49□□□□□ -1.37
CHRD-217ENST00000496527 KRTAP4-11Q9BYQ6 195 aa6.37□□□□□ -1.39
CHRD-217ENST00000496527 MT3P25713 68 aa6.32□□□□□ -1.4
CHRD-217ENST00000496527 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
CHRD-217ENST00000496527 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
CHRD-217ENST00000496527 OBSCNQ5VST9 7968 aa6.02□□□□□ -1.45
CHRD-217ENST00000496527 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
CHRD-217ENST00000496527 KRTAP5-1Q6L8H4 278 aa5.86□□□□□ -1.47
CHRD-217ENST00000496527 KRTAP9-9Q9BYP9 154 aa5.81□□□□□ -1.48
CHRD-217ENST00000496527 LCE1EQ5T753 118 aa5.73□□□□□ -1.49
CHRD-217ENST00000496527 MUC5ACP98088 5654 aa5.65□□□□□ -1.5
CHRD-217ENST00000496527 MUC5BQ9HC84 5762 aaPredicted RBP5.64□□□□□ -1.51
CHRD-217ENST00000496527 AHNAKQ09666 5890 aaKnown RBP5.58□□□□□ -1.52
CHRD-217ENST00000496527 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
CHRD-217ENST00000496527 LCE3DQ9BYE3 92 aa5.4□□□□□ -1.54
CHRD-217ENST00000496527 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
CHRD-217ENST00000496527 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
CHRD-217ENST00000496527 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
CHRD-217ENST00000496527 LCE3EQ5T5B0 92 aa5.13□□□□□ -1.59
CHRD-217ENST00000496527 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
CHRD-217ENST00000496527 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
CHRD-217ENST00000496527 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
CHRD-217ENST00000496527 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
CHRD-217ENST00000496527 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
CHRD-217ENST00000496527 KRTAP21-2Q3LI59 83 aa4.5□□□□□ -1.69
CHRD-217ENST00000496527 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
CHRD-217ENST00000496527 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
CHRD-217ENST00000496527 PRM1P04553 51 aa3.99□□□□□ -1.77
CHRD-217ENST00000496527 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
CHRD-217ENST00000496527 INE1O15225 51 aa3.77□□□□□ -1.81
CHRD-217ENST00000496527 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
CHRD-217ENST00000496527 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
CHRD-217ENST00000496527 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
CHRD-217ENST00000496527 H3BS24 57 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 104.6 ms