RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
NEPRO-224ENST00000496340 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
NEPRO-224ENST00000496340 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
NEPRO-224ENST00000496340 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
NEPRO-224ENST00000496340 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
NEPRO-224ENST00000496340 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
NEPRO-224ENST00000496340 MT1LQ93083 61 aa3.89□□□□□ -1.79
NEPRO-224ENST00000496340 MT1GP13640 62 aa3.88□□□□□ -1.79
NEPRO-224ENST00000496340 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
NEPRO-224ENST00000496340 MT1MQ8N339 61 aa3.86□□□□□ -1.79
NEPRO-224ENST00000496340 TMEM258P61165 79 aa3.85□□□□□ -1.79
NEPRO-224ENST00000496340 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
NEPRO-224ENST00000496340 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
NEPRO-224ENST00000496340 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
NEPRO-224ENST00000496340 TNP1P09430 55 aa3.82□□□□□ -1.8
NEPRO-224ENST00000496340 UQCR11O14957 56 aa3.76□□□□□ -1.81
NEPRO-224ENST00000496340 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
NEPRO-224ENST00000496340 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
NEPRO-224ENST00000496340 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
NEPRO-224ENST00000496340 V9GYY9 64 aa3.73□□□□□ -1.81
NEPRO-224ENST00000496340 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
NEPRO-224ENST00000496340 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
NEPRO-224ENST00000496340 PSPHP1O15172 72 aa3.7□□□□□ -1.82
NEPRO-224ENST00000496340 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
NEPRO-224ENST00000496340 MT4P47944 62 aa3.69□□□□□ -1.82
NEPRO-224ENST00000496340 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
NEPRO-224ENST00000496340 Q1T7F1 81 aa3.66□□□□□ -1.82
NEPRO-224ENST00000496340 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
NEPRO-224ENST00000496340 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
NEPRO-224ENST00000496340 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
NEPRO-224ENST00000496340 K7ERS5 55 aa3.51□□□□□ -1.85
NEPRO-224ENST00000496340 A6NED7 52 aa3.5□□□□□ -1.85
NEPRO-224ENST00000496340 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
NEPRO-224ENST00000496340 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
NEPRO-224ENST00000496340 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.85
NEPRO-224ENST00000496340 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
NEPRO-224ENST00000496340 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
NEPRO-224ENST00000496340 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
NEPRO-224ENST00000496340 CDC42SE1Q9NRR8 79 aa3.4□□□□□ -1.87
NEPRO-224ENST00000496340 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
NEPRO-224ENST00000496340 ROMO1P60602 79 aa3.39□□□□□ -1.87
NEPRO-224ENST00000496340 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
NEPRO-224ENST00000496340 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
NEPRO-224ENST00000496340 PRO0628Q9UI54 55 aa3.36□□□□□ -1.87
NEPRO-224ENST00000496340 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
NEPRO-224ENST00000496340 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
NEPRO-224ENST00000496340 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
NEPRO-224ENST00000496340 MT1AP04731 61 aa3.28□□□□□ -1.88
NEPRO-224ENST00000496340 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
NEPRO-224ENST00000496340 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
NEPRO-224ENST00000496340 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
NEPRO-224ENST00000496340 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
NEPRO-224ENST00000496340 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
NEPRO-224ENST00000496340 MT3P25713 68 aa3.06□□□□□ -1.92
NEPRO-224ENST00000496340 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
NEPRO-224ENST00000496340 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
NEPRO-224ENST00000496340 NDUFAF8A1L188 74 aa3□□□□□ -1.93
NEPRO-224ENST00000496340 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
NEPRO-224ENST00000496340 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
NEPRO-224ENST00000496340 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
NEPRO-224ENST00000496340 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
NEPRO-224ENST00000496340 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
NEPRO-224ENST00000496340 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
NEPRO-224ENST00000496340 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
NEPRO-224ENST00000496340 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
NEPRO-224ENST00000496340 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
NEPRO-224ENST00000496340 LCE1CQ5T751 118 aa2.54□□□□□ -2
NEPRO-224ENST00000496340 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
NEPRO-224ENST00000496340 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
NEPRO-224ENST00000496340 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
NEPRO-224ENST00000496340 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
NEPRO-224ENST00000496340 INE1O15225 51 aa2.17□□□□□ -2.06
NEPRO-224ENST00000496340 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
NEPRO-224ENST00000496340 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
NEPRO-224ENST00000496340 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
NEPRO-224ENST00000496340 PRM1P04553 51 aa1.77□□□□□ -2.13
NEPRO-224ENST00000496340 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
NEPRO-224ENST00000496340 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 93.5 ms