RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 MT1EP04732 61 aa3.31□□□□□ -1.88
GAPVD1-219ENST00000495955 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
GAPVD1-219ENST00000495955 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
GAPVD1-219ENST00000495955 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
GAPVD1-219ENST00000495955 MT1LQ93083 61 aa3.26□□□□□ -1.89
GAPVD1-219ENST00000495955 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
GAPVD1-219ENST00000495955 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
GAPVD1-219ENST00000495955 LCE3BQ5TA77 95 aa3.19□□□□□ -1.9
GAPVD1-219ENST00000495955 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
GAPVD1-219ENST00000495955 MT1MQ8N339 61 aa3.18□□□□□ -1.9
GAPVD1-219ENST00000495955 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
GAPVD1-219ENST00000495955 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
GAPVD1-219ENST00000495955 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
GAPVD1-219ENST00000495955 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
GAPVD1-219ENST00000495955 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
GAPVD1-219ENST00000495955 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
GAPVD1-219ENST00000495955 INE1O15225 51 aa3.07□□□□□ -1.92
GAPVD1-219ENST00000495955 KMT2DO14686 5537 aa3.07□□□□□ -1.92
GAPVD1-219ENST00000495955 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
GAPVD1-219ENST00000495955 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
GAPVD1-219ENST00000495955 MT4P47944 62 aa3.05□□□□□ -1.92
GAPVD1-219ENST00000495955 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.92
GAPVD1-219ENST00000495955 LCE5AQ5TCM9 118 aa3.02□□□□□ -1.93
GAPVD1-219ENST00000495955 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
GAPVD1-219ENST00000495955 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
GAPVD1-219ENST00000495955 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
GAPVD1-219ENST00000495955 NEBP20929 6669 aa2.93□□□□□ -1.94
GAPVD1-219ENST00000495955 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
GAPVD1-219ENST00000495955 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
GAPVD1-219ENST00000495955 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
GAPVD1-219ENST00000495955 MT1AP04731 61 aa2.83□□□□□ -1.96
GAPVD1-219ENST00000495955 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
GAPVD1-219ENST00000495955 MT3P25713 68 aa2.79□□□□□ -1.96
GAPVD1-219ENST00000495955 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
GAPVD1-219ENST00000495955 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
GAPVD1-219ENST00000495955 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
GAPVD1-219ENST00000495955 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
GAPVD1-219ENST00000495955 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
GAPVD1-219ENST00000495955 KRTAP9-4Q9BYQ2 154 aa2.68□□□□□ -1.98
GAPVD1-219ENST00000495955 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
GAPVD1-219ENST00000495955 LCE1DQ5T752 114 aa2.65□□□□□ -1.98
GAPVD1-219ENST00000495955 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
GAPVD1-219ENST00000495955 KRTAP4-6Q9BYQ5 205 aa2.61□□□□□ -1.99
GAPVD1-219ENST00000495955 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -1.99
GAPVD1-219ENST00000495955 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
GAPVD1-219ENST00000495955 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
GAPVD1-219ENST00000495955 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
GAPVD1-219ENST00000495955 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
GAPVD1-219ENST00000495955 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
GAPVD1-219ENST00000495955 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
GAPVD1-219ENST00000495955 PRM1P04553 51 aa2.3□□□□□ -2.04
GAPVD1-219ENST00000495955 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
GAPVD1-219ENST00000495955 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
GAPVD1-219ENST00000495955 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
GAPVD1-219ENST00000495955 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
GAPVD1-219ENST00000495955 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
GAPVD1-219ENST00000495955 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
GAPVD1-219ENST00000495955 LCE1CQ5T751 118 aa2.09□□□□□ -2.08
GAPVD1-219ENST00000495955 LCE1FQ5T754 118 aa2.09□□□□□ -2.08
GAPVD1-219ENST00000495955 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
GAPVD1-219ENST00000495955 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
GAPVD1-219ENST00000495955 KRTAP4-12Q9BQ66 201 aa1.99□□□□□ -2.09
GAPVD1-219ENST00000495955 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
GAPVD1-219ENST00000495955 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
GAPVD1-219ENST00000495955 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
GAPVD1-219ENST00000495955 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
GAPVD1-219ENST00000495955 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
GAPVD1-219ENST00000495955 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
GAPVD1-219ENST00000495955 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
GAPVD1-219ENST00000495955 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
GAPVD1-219ENST00000495955 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
GAPVD1-219ENST00000495955 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
GAPVD1-219ENST00000495955 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
GAPVD1-219ENST00000495955 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
GAPVD1-219ENST00000495955 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
GAPVD1-219ENST00000495955 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
GAPVD1-219ENST00000495955 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 70.3 ms