RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 A0A1B0GU69 56 aa5.02□□□□□ -1.61
PTPN18-216ENST00000495400 COX7CP15954 63 aa5□□□□□ -1.61
PTPN18-216ENST00000495400 H7BZZ5 65 aa4.98□□□□□ -1.61
PTPN18-216ENST00000495400 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
PTPN18-216ENST00000495400 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
PTPN18-216ENST00000495400 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
PTPN18-216ENST00000495400 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
PTPN18-216ENST00000495400 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
PTPN18-216ENST00000495400 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
PTPN18-216ENST00000495400 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
PTPN18-216ENST00000495400 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
PTPN18-216ENST00000495400 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
PTPN18-216ENST00000495400 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
PTPN18-216ENST00000495400 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
PTPN18-216ENST00000495400 LINC01558Q9Y6Z2 57 aa4.7□□□□□ -1.66
PTPN18-216ENST00000495400 ANAPC13Q9BS18 74 aa4.67□□□□□ -1.66
PTPN18-216ENST00000495400 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
PTPN18-216ENST00000495400 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
PTPN18-216ENST00000495400 UQCR11O14957 56 aa4.63□□□□□ -1.67
PTPN18-216ENST00000495400 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
PTPN18-216ENST00000495400 CCDC179H3BU77 68 aa4.59□□□□□ -1.67
PTPN18-216ENST00000495400 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
PTPN18-216ENST00000495400 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
PTPN18-216ENST00000495400 MIR22HGQ0VDD5 57 aa4.5□□□□□ -1.69
PTPN18-216ENST00000495400 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
PTPN18-216ENST00000495400 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
PTPN18-216ENST00000495400 K7ERS5 55 aa4.47□□□□□ -1.69
PTPN18-216ENST00000495400 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
PTPN18-216ENST00000495400 MT1AP04731 61 aa4.45□□□□□ -1.7
PTPN18-216ENST00000495400 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
PTPN18-216ENST00000495400 PCP4P48539 62 aa4.41□□□□□ -1.7
PTPN18-216ENST00000495400 TMEM258P61165 79 aa4.39□□□□□ -1.71
PTPN18-216ENST00000495400 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
PTPN18-216ENST00000495400 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
PTPN18-216ENST00000495400 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
PTPN18-216ENST00000495400 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
PTPN18-216ENST00000495400 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
PTPN18-216ENST00000495400 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
PTPN18-216ENST00000495400 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
PTPN18-216ENST00000495400 PSPHP1O15172 72 aa4.26□□□□□ -1.73
PTPN18-216ENST00000495400 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
PTPN18-216ENST00000495400 V9GYY9 64 aa4.24□□□□□ -1.73
PTPN18-216ENST00000495400 Q1T7F1 81 aa4.2□□□□□ -1.74
PTPN18-216ENST00000495400 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
PTPN18-216ENST00000495400 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
PTPN18-216ENST00000495400 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
PTPN18-216ENST00000495400 ROMO1P60602 79 aa4.11□□□□□ -1.75
PTPN18-216ENST00000495400 A6NED7 52 aa4.1□□□□□ -1.75
PTPN18-216ENST00000495400 MT3P25713 68 aa4.09□□□□□ -1.75
PTPN18-216ENST00000495400 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
PTPN18-216ENST00000495400 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
PTPN18-216ENST00000495400 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
PTPN18-216ENST00000495400 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
PTPN18-216ENST00000495400 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
PTPN18-216ENST00000495400 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
PTPN18-216ENST00000495400 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
PTPN18-216ENST00000495400 PMAIP1Q13794 54 aa3.47□□□□□ -1.85
PTPN18-216ENST00000495400 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
PTPN18-216ENST00000495400 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
PTPN18-216ENST00000495400 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
PTPN18-216ENST00000495400 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
PTPN18-216ENST00000495400 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
PTPN18-216ENST00000495400 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
PTPN18-216ENST00000495400 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
PTPN18-216ENST00000495400 SVIPQ8NHG7 77 aa3.06□□□□□ -1.92
PTPN18-216ENST00000495400 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
PTPN18-216ENST00000495400 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
PTPN18-216ENST00000495400 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
PTPN18-216ENST00000495400 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
PTPN18-216ENST00000495400 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
PTPN18-216ENST00000495400 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
PTPN18-216ENST00000495400 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
PTPN18-216ENST00000495400 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
PTPN18-216ENST00000495400 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
PTPN18-216ENST00000495400 INE1O15225 51 aa2.14□□□□□ -2.07
PTPN18-216ENST00000495400 PRM1P04553 51 aa2.08□□□□□ -2.08
PTPN18-216ENST00000495400 H3BS24 57 aa1.93□□□□□ -2.1
PTPN18-216ENST00000495400 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms