RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
RBM39-240ENST00000495293 S4R3F8 94 aa2.2□□□□□ -2.06
RBM39-240ENST00000495293 CSAG1Q6PB30 78 aa2.19□□□□□ -2.06
RBM39-240ENST00000495293 H0YAA0 97 aa2.17□□□□□ -2.06
RBM39-240ENST00000495293 FLGP20930 4061 aaPredicted RBP2.16□□□□□ -2.06
RBM39-240ENST00000495293 ROMO1P60602 79 aa2.15□□□□□ -2.07
RBM39-240ENST00000495293 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
RBM39-240ENST00000495293 A0A0D9SG42 100 aa2.14□□□□□ -2.07
RBM39-240ENST00000495293 KRTAP10-10P60014 251 aa2.14□□□□□ -2.07
RBM39-240ENST00000495293 CRIPTQ9P021 101 aa2.13□□□□□ -2.07
RBM39-240ENST00000495293 R4GN34 69 aa2.13□□□□□ -2.07
RBM39-240ENST00000495293 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
RBM39-240ENST00000495293 MT2AP02795 61 aa2.11□□□□□ -2.07
RBM39-240ENST00000495293 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
RBM39-240ENST00000495293 M0QZ58 72 aa2.1□□□□□ -2.07
RBM39-240ENST00000495293 MT1FP04733 61 aa2.09□□□□□ -2.07
RBM39-240ENST00000495293 P0C880 135 aa2.05□□□□□ -2.08
RBM39-240ENST00000495293 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
RBM39-240ENST00000495293 USH2AO75445 5202 aa2.02□□□□□ -2.09
RBM39-240ENST00000495293 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
RBM39-240ENST00000495293 KRTAP12-1P59990 96 aa2□□□□□ -2.09
RBM39-240ENST00000495293 SSPOA2VEC9 5147 aa2□□□□□ -2.09
RBM39-240ENST00000495293 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
RBM39-240ENST00000495293 SPRR2GQ9BYE4 73 aa1.98□□□□□ -2.09
RBM39-240ENST00000495293 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
RBM39-240ENST00000495293 KRTAP19-6Q3LI70 58 aa1.97□□□□□ -2.09
RBM39-240ENST00000495293 KRTAP19-8Q3LI54 63 aa1.95□□□□□ -2.1
RBM39-240ENST00000495293 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
RBM39-240ENST00000495293 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
RBM39-240ENST00000495293 MT1BP07438 61 aa1.92□□□□□ -2.1
RBM39-240ENST00000495293 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
RBM39-240ENST00000495293 SYNE2Q8WXH0 6885 aaKnown RBP1.91□□□□□ -2.1
RBM39-240ENST00000495293 MACF1Q9UPN3 7388 aaKnown RBP1.89□□□□□ -2.11
RBM39-240ENST00000495293 TNP1P09430 55 aa1.89□□□□□ -2.11
RBM39-240ENST00000495293 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
RBM39-240ENST00000495293 MT1XP80297 61 aa1.82□□□□□ -2.12
RBM39-240ENST00000495293 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
RBM39-240ENST00000495293 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
RBM39-240ENST00000495293 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
RBM39-240ENST00000495293 NEBP20929 6669 aa1.74□□□□□ -2.13
RBM39-240ENST00000495293 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
RBM39-240ENST00000495293 KMT2DO14686 5537 aa1.73□□□□□ -2.13
RBM39-240ENST00000495293 SPRR2EP22531 72 aa1.73□□□□□ -2.13
RBM39-240ENST00000495293 SPRR2BP35325 72 aa1.73□□□□□ -2.13
RBM39-240ENST00000495293 SPRR2AP35326 72 aa1.73□□□□□ -2.13
RBM39-240ENST00000495293 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
RBM39-240ENST00000495293 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
RBM39-240ENST00000495293 SPRR2DP22532 72 aa1.68□□□□□ -2.14
RBM39-240ENST00000495293 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
RBM39-240ENST00000495293 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
RBM39-240ENST00000495293 KRTAP12-3P60328 96 aa1.66□□□□□ -2.14
RBM39-240ENST00000495293 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
RBM39-240ENST00000495293 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
RBM39-240ENST00000495293 INE1O15225 51 aa1.62□□□□□ -2.15
RBM39-240ENST00000495293 MT1EP04732 61 aa1.62□□□□□ -2.15
RBM39-240ENST00000495293 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
RBM39-240ENST00000495293 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
RBM39-240ENST00000495293 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
RBM39-240ENST00000495293 MT1GP13640 62 aa1.6□□□□□ -2.15
RBM39-240ENST00000495293 MT1LQ93083 61 aa1.56□□□□□ -2.16
RBM39-240ENST00000495293 MT1MQ8N339 61 aa1.54□□□□□ -2.16
RBM39-240ENST00000495293 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.16
RBM39-240ENST00000495293 MT4P47944 62 aa1.45□□□□□ -2.18
RBM39-240ENST00000495293 GPR98Q8WXG9 6306 aa1.35□□□□□ -2.19
RBM39-240ENST00000495293 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
RBM39-240ENST00000495293 MT1AP04731 61 aa1.34□□□□□ -2.19
RBM39-240ENST00000495293 SYNE1Q8NF91 8797 aaKnown RBP1.33□□□□□ -2.2
RBM39-240ENST00000495293 KRTAP6-1Q3LI64 71 aa1.31□□□□□ -2.2
RBM39-240ENST00000495293 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
RBM39-240ENST00000495293 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
RBM39-240ENST00000495293 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
RBM39-240ENST00000495293 PRM1P04553 51 aa1.12□□□□□ -2.23
RBM39-240ENST00000495293 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
RBM39-240ENST00000495293 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
RBM39-240ENST00000495293 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
RBM39-240ENST00000495293 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
RBM39-240ENST00000495293 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
RBM39-240ENST00000495293 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms