RNA–Protein interactions for RNA: ENST00000494917.6

CCDC180-206, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 2,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-206ENST00000494917 MT1EP04732 61 aa3.91□□□□□ -1.78
CCDC180-206ENST00000494917 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
CCDC180-206ENST00000494917 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
CCDC180-206ENST00000494917 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
CCDC180-206ENST00000494917 MT1LQ93083 61 aa3.85□□□□□ -1.79
CCDC180-206ENST00000494917 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
CCDC180-206ENST00000494917 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
CCDC180-206ENST00000494917 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
CCDC180-206ENST00000494917 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
CCDC180-206ENST00000494917 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
CCDC180-206ENST00000494917 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
CCDC180-206ENST00000494917 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
CCDC180-206ENST00000494917 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
CCDC180-206ENST00000494917 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
CCDC180-206ENST00000494917 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
CCDC180-206ENST00000494917 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
CCDC180-206ENST00000494917 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
CCDC180-206ENST00000494917 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
CCDC180-206ENST00000494917 MT1MQ8N339 61 aa3.68□□□□□ -1.82
CCDC180-206ENST00000494917 MT1GP13640 62 aa3.66□□□□□ -1.82
CCDC180-206ENST00000494917 LOC100996750A0A140TA64 210 aa3.64□□□□□ -1.83
CCDC180-206ENST00000494917 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
CCDC180-206ENST00000494917 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
CCDC180-206ENST00000494917 SPRR2EP22531 72 aa3.5□□□□□ -1.85
CCDC180-206ENST00000494917 SPRR2BP35325 72 aa3.5□□□□□ -1.85
CCDC180-206ENST00000494917 SPRR2AP35326 72 aa3.5□□□□□ -1.85
CCDC180-206ENST00000494917 NEBP20929 6669 aa3.46□□□□□ -1.86
CCDC180-206ENST00000494917 KRTAP12-4P60329 112 aa3.4□□□□□ -1.87
CCDC180-206ENST00000494917 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
CCDC180-206ENST00000494917 SPRR2DP22532 72 aa3.35□□□□□ -1.87
CCDC180-206ENST00000494917 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
CCDC180-206ENST00000494917 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
CCDC180-206ENST00000494917 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
CCDC180-206ENST00000494917 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.89
CCDC180-206ENST00000494917 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
CCDC180-206ENST00000494917 MT1AP04731 61 aa3.23□□□□□ -1.89
CCDC180-206ENST00000494917 KRTAP4-9Q9BYQ8 210 aa3.17□□□□□ -1.9
CCDC180-206ENST00000494917 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
CCDC180-206ENST00000494917 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
CCDC180-206ENST00000494917 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CCDC180-206ENST00000494917 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
CCDC180-206ENST00000494917 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
CCDC180-206ENST00000494917 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
CCDC180-206ENST00000494917 PRM1P04553 51 aa3.03□□□□□ -1.92
CCDC180-206ENST00000494917 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
CCDC180-206ENST00000494917 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
CCDC180-206ENST00000494917 MT4P47944 62 aa2.98□□□□□ -1.93
CCDC180-206ENST00000494917 KRTAP4-6Q9BYQ5 205 aa2.98□□□□□ -1.93
CCDC180-206ENST00000494917 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
CCDC180-206ENST00000494917 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
CCDC180-206ENST00000494917 MT3P25713 68 aa2.91□□□□□ -1.94
CCDC180-206ENST00000494917 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
CCDC180-206ENST00000494917 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
CCDC180-206ENST00000494917 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
CCDC180-206ENST00000494917 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
CCDC180-206ENST00000494917 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
CCDC180-206ENST00000494917 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
CCDC180-206ENST00000494917 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
CCDC180-206ENST00000494917 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
CCDC180-206ENST00000494917 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
CCDC180-206ENST00000494917 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
CCDC180-206ENST00000494917 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
CCDC180-206ENST00000494917 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
CCDC180-206ENST00000494917 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
CCDC180-206ENST00000494917 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
CCDC180-206ENST00000494917 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
CCDC180-206ENST00000494917 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CCDC180-206ENST00000494917 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
CCDC180-206ENST00000494917 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
CCDC180-206ENST00000494917 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
CCDC180-206ENST00000494917 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CCDC180-206ENST00000494917 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
CCDC180-206ENST00000494917 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
CCDC180-206ENST00000494917 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
CCDC180-206ENST00000494917 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
CCDC180-206ENST00000494917 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
CCDC180-206ENST00000494917 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
CCDC180-206ENST00000494917 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 1617.5 ms