RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
SAMM50-206ENST00000494795 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
SAMM50-206ENST00000494795 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
SAMM50-206ENST00000494795 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
SAMM50-206ENST00000494795 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
SAMM50-206ENST00000494795 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
SAMM50-206ENST00000494795 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
SAMM50-206ENST00000494795 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
SAMM50-206ENST00000494795 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
SAMM50-206ENST00000494795 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
SAMM50-206ENST00000494795 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
SAMM50-206ENST00000494795 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
SAMM50-206ENST00000494795 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
SAMM50-206ENST00000494795 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
SAMM50-206ENST00000494795 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
SAMM50-206ENST00000494795 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
SAMM50-206ENST00000494795 MT1EP04732 61 aa3.69□□□□□ -1.82
SAMM50-206ENST00000494795 MT1LQ93083 61 aa3.66□□□□□ -1.82
SAMM50-206ENST00000494795 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
SAMM50-206ENST00000494795 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
SAMM50-206ENST00000494795 MT3P25713 68 aa3.59□□□□□ -1.84
SAMM50-206ENST00000494795 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
SAMM50-206ENST00000494795 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
SAMM50-206ENST00000494795 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
SAMM50-206ENST00000494795 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
SAMM50-206ENST00000494795 MT1GP13640 62 aa3.47□□□□□ -1.85
SAMM50-206ENST00000494795 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
SAMM50-206ENST00000494795 MT1MQ8N339 61 aa3.46□□□□□ -1.86
SAMM50-206ENST00000494795 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
SAMM50-206ENST00000494795 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
SAMM50-206ENST00000494795 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
SAMM50-206ENST00000494795 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
SAMM50-206ENST00000494795 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
SAMM50-206ENST00000494795 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
SAMM50-206ENST00000494795 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SAMM50-206ENST00000494795 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
SAMM50-206ENST00000494795 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
SAMM50-206ENST00000494795 SPRR2EP22531 72 aa3.23□□□□□ -1.89
SAMM50-206ENST00000494795 SPRR2BP35325 72 aa3.23□□□□□ -1.89
SAMM50-206ENST00000494795 SPRR2AP35326 72 aa3.23□□□□□ -1.89
SAMM50-206ENST00000494795 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
SAMM50-206ENST00000494795 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
SAMM50-206ENST00000494795 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
SAMM50-206ENST00000494795 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
SAMM50-206ENST00000494795 SPRR2DP22532 72 aa3.08□□□□□ -1.92
SAMM50-206ENST00000494795 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
SAMM50-206ENST00000494795 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
SAMM50-206ENST00000494795 MT1AP04731 61 aa3.02□□□□□ -1.93
SAMM50-206ENST00000494795 NEBP20929 6669 aa3□□□□□ -1.93
SAMM50-206ENST00000494795 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
SAMM50-206ENST00000494795 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
SAMM50-206ENST00000494795 MT4P47944 62 aa2.81□□□□□ -1.96
SAMM50-206ENST00000494795 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
SAMM50-206ENST00000494795 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
SAMM50-206ENST00000494795 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
SAMM50-206ENST00000494795 PRM1P04553 51 aa2.68□□□□□ -1.98
SAMM50-206ENST00000494795 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.98
SAMM50-206ENST00000494795 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
SAMM50-206ENST00000494795 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
SAMM50-206ENST00000494795 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
SAMM50-206ENST00000494795 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
SAMM50-206ENST00000494795 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
SAMM50-206ENST00000494795 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
SAMM50-206ENST00000494795 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
SAMM50-206ENST00000494795 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
SAMM50-206ENST00000494795 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
SAMM50-206ENST00000494795 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
SAMM50-206ENST00000494795 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
SAMM50-206ENST00000494795 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
SAMM50-206ENST00000494795 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
SAMM50-206ENST00000494795 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
SAMM50-206ENST00000494795 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
SAMM50-206ENST00000494795 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
SAMM50-206ENST00000494795 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SAMM50-206ENST00000494795 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
SAMM50-206ENST00000494795 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
SAMM50-206ENST00000494795 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.16
SAMM50-206ENST00000494795 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 123 ms