RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 A0A1B0GU69 56 aa7.97□□□□□ -1.13
COL27A1-208ENST00000494780 A8MU10 97 aa7.96□□□□□ -1.14
COL27A1-208ENST00000494780 H7BZZ5 65 aa7.95□□□□□ -1.14
COL27A1-208ENST00000494780 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
COL27A1-208ENST00000494780 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
COL27A1-208ENST00000494780 KRTAP5-7Q6L8G8 165 aa7.74□□□□□ -1.17
COL27A1-208ENST00000494780 KRTAP5-3Q6L8H2 238 aa7.74□□□□□ -1.17
COL27A1-208ENST00000494780 KRTAP20-2Q3LI61 65 aa7.68□□□□□ -1.18
COL27A1-208ENST00000494780 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
COL27A1-208ENST00000494780 PRR15LQ9BU68 103 aa7.64□□□□□ -1.19
COL27A1-208ENST00000494780 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
COL27A1-208ENST00000494780 KRTAP12-4P60329 112 aa7.54□□□□□ -1.2
COL27A1-208ENST00000494780 ANAPC13Q9BS18 74 aa7.47□□□□□ -1.21
COL27A1-208ENST00000494780 LINC01558Q9Y6Z2 57 aa7.47□□□□□ -1.21
COL27A1-208ENST00000494780 ATP5EP56381 51 aaPredicted RBP7.41□□□□□ -1.22
COL27A1-208ENST00000494780 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.22
COL27A1-208ENST00000494780 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
COL27A1-208ENST00000494780 UQCR11O14957 56 aa7.37□□□□□ -1.23
COL27A1-208ENST00000494780 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
COL27A1-208ENST00000494780 SYNE1Q8NF91 8797 aaKnown RBP7.34□□□□□ -1.23
COL27A1-208ENST00000494780 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
COL27A1-208ENST00000494780 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
COL27A1-208ENST00000494780 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
COL27A1-208ENST00000494780 K7ERS5 55 aa7.12□□□□□ -1.27
COL27A1-208ENST00000494780 LCE3CQ5T5A8 94 aa7.12□□□□□ -1.27
COL27A1-208ENST00000494780 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
COL27A1-208ENST00000494780 KRTAP4-11Q9BYQ6 195 aa7.1□□□□□ -1.27
COL27A1-208ENST00000494780 TMEM258P61165 79 aa7.05□□□□□ -1.28
COL27A1-208ENST00000494780 KRTAP5-2Q701N4 177 aa7.05□□□□□ -1.28
COL27A1-208ENST00000494780 MT1AP04731 61 aa7.01□□□□□ -1.29
COL27A1-208ENST00000494780 KRTAP6-1Q3LI64 71 aa6.97□□□□□ -1.29
COL27A1-208ENST00000494780 KRTAP5-8O75690 187 aa6.86□□□□□ -1.31
COL27A1-208ENST00000494780 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
COL27A1-208ENST00000494780 PSPHP1O15172 72 aa6.8□□□□□ -1.32
COL27A1-208ENST00000494780 V9GYY9 64 aa6.78□□□□□ -1.32
COL27A1-208ENST00000494780 KRTAP6-2Q3LI66 62 aa6.74□□□□□ -1.33
COL27A1-208ENST00000494780 AHNAKQ09666 5890 aaKnown RBP6.73□□□□□ -1.33
COL27A1-208ENST00000494780 MUC5ACP98088 5654 aa6.73□□□□□ -1.33
COL27A1-208ENST00000494780 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
COL27A1-208ENST00000494780 Q1T7F1 81 aa6.7□□□□□ -1.34
COL27A1-208ENST00000494780 MUC5BQ9HC84 5762 aaPredicted RBP6.69□□□□□ -1.34
COL27A1-208ENST00000494780 CDC42SE1Q9NRR8 79 aa6.68□□□□□ -1.34
COL27A1-208ENST00000494780 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
COL27A1-208ENST00000494780 KRTAP9-9Q9BYP9 154 aa6.58□□□□□ -1.36
COL27A1-208ENST00000494780 OBSCNQ5VST9 7968 aa6.56□□□□□ -1.36
COL27A1-208ENST00000494780 A6NED7 52 aa6.55□□□□□ -1.36
COL27A1-208ENST00000494780 ROMO1P60602 79 aa6.55□□□□□ -1.36
COL27A1-208ENST00000494780 MT3P25713 68 aa6.44□□□□□ -1.38
COL27A1-208ENST00000494780 KRTAP5-1Q6L8H4 278 aa6.38□□□□□ -1.39
COL27A1-208ENST00000494780 PCP4P48539 62 aa6.18□□□□□ -1.42
COL27A1-208ENST00000494780 LCE1EQ5T753 118 aa6.01□□□□□ -1.45
COL27A1-208ENST00000494780 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
COL27A1-208ENST00000494780 LCE1BQ5T7P3 118 aa5.65□□□□□ -1.5
COL27A1-208ENST00000494780 LCE1CQ5T751 118 aa5.57□□□□□ -1.52
COL27A1-208ENST00000494780 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
COL27A1-208ENST00000494780 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
COL27A1-208ENST00000494780 BRK1Q8WUW1 75 aa5.15□□□□□ -1.59
COL27A1-208ENST00000494780 KRTAP5-11Q6L8G4 156 aa5.07□□□□□ -1.6
COL27A1-208ENST00000494780 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
COL27A1-208ENST00000494780 PRO0628Q9UI54 55 aa5.05□□□□□ -1.6
COL27A1-208ENST00000494780 LCE1FQ5T754 118 aa5.03□□□□□ -1.6
COL27A1-208ENST00000494780 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
COL27A1-208ENST00000494780 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
COL27A1-208ENST00000494780 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
COL27A1-208ENST00000494780 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
COL27A1-208ENST00000494780 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
COL27A1-208ENST00000494780 PHGR1C9JFL3 82 aa4.67□□□□□ -1.66
COL27A1-208ENST00000494780 KRTAP21-2Q3LI59 83 aa4.61□□□□□ -1.67
COL27A1-208ENST00000494780 H3BS24 57 aa4.46□□□□□ -1.7
COL27A1-208ENST00000494780 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
COL27A1-208ENST00000494780 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
COL27A1-208ENST00000494780 MUC19Q7Z5P9 8384 aa4.08□□□□□ -1.76
COL27A1-208ENST00000494780 KRTAP21-1Q3LI58 79 aa3.57□□□□□ -1.84
COL27A1-208ENST00000494780 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
COL27A1-208ENST00000494780 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
COL27A1-208ENST00000494780 PRM1P04553 51 aa3.31□□□□□ -1.88
COL27A1-208ENST00000494780 INE1O15225 51 aa3.13□□□□□ -1.91
COL27A1-208ENST00000494780 MUC16Q8WXI7 14507 aa2.92□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 13.7 ms