RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 A6NED7 52 aa7.51□□□□□ -1.21
CCDC12-207ENST00000494655 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
CCDC12-207ENST00000494655 MT1GP13640 62 aa7.48□□□□□ -1.21
CCDC12-207ENST00000494655 RPS28P62857 69 aaKnown RBP7.46□□□□□ -1.22
CCDC12-207ENST00000494655 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
CCDC12-207ENST00000494655 MT1LQ93083 61 aa7.39□□□□□ -1.23
CCDC12-207ENST00000494655 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
CCDC12-207ENST00000494655 MT1MQ8N339 61 aa7.33□□□□□ -1.24
CCDC12-207ENST00000494655 DSTQ03001 7570 aaKnown RBP7.33□□□□□ -1.24
CCDC12-207ENST00000494655 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
CCDC12-207ENST00000494655 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
CCDC12-207ENST00000494655 ROMO1P60602 79 aa7.1□□□□□ -1.27
CCDC12-207ENST00000494655 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
CCDC12-207ENST00000494655 KRTAP4-9Q9BYQ8 210 aa7.02□□□□□ -1.29
CCDC12-207ENST00000494655 LCE4AQ5TA78 99 aa7□□□□□ -1.29
CCDC12-207ENST00000494655 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
CCDC12-207ENST00000494655 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
CCDC12-207ENST00000494655 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
CCDC12-207ENST00000494655 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
CCDC12-207ENST00000494655 MT4P47944 62 aa6.88□□□□□ -1.31
CCDC12-207ENST00000494655 KRTAP5-4Q6L8H1 288 aa6.84□□□□□ -1.31
CCDC12-207ENST00000494655 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
CCDC12-207ENST00000494655 HMCN1Q96RW7 5635 aa6.75□□□□□ -1.33
CCDC12-207ENST00000494655 GPR98Q8WXG9 6306 aa6.67□□□□□ -1.34
CCDC12-207ENST00000494655 KRTAP5-5Q701N2 237 aaPredicted RBP6.66□□□□□ -1.34
CCDC12-207ENST00000494655 BRK1Q8WUW1 75 aa6.66□□□□□ -1.34
CCDC12-207ENST00000494655 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
CCDC12-207ENST00000494655 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
CCDC12-207ENST00000494655 KRTAP12-4P60329 112 aa6.55□□□□□ -1.36
CCDC12-207ENST00000494655 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
CCDC12-207ENST00000494655 KRTAP20-2Q3LI61 65 aa6.47□□□□□ -1.37
CCDC12-207ENST00000494655 AHNAK2Q8IVF2 5795 aa6.4□□□□□ -1.39
CCDC12-207ENST00000494655 MT1AP04731 61 aa6.33□□□□□ -1.4
CCDC12-207ENST00000494655 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
CCDC12-207ENST00000494655 KRTAP5-10Q6L8G5 202 aa6.28□□□□□ -1.4
CCDC12-207ENST00000494655 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
CCDC12-207ENST00000494655 PMAIP1Q13794 54 aa6.26□□□□□ -1.41
CCDC12-207ENST00000494655 KRTAP6-1Q3LI64 71 aa6.23□□□□□ -1.41
CCDC12-207ENST00000494655 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
CCDC12-207ENST00000494655 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
CCDC12-207ENST00000494655 KRTAP5-7Q6L8G8 165 aa6.03□□□□□ -1.44
CCDC12-207ENST00000494655 KRTAP5-2Q701N4 177 aa6.03□□□□□ -1.44
CCDC12-207ENST00000494655 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
CCDC12-207ENST00000494655 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
CCDC12-207ENST00000494655 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
CCDC12-207ENST00000494655 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
CCDC12-207ENST00000494655 MT3P25713 68 aa5.8□□□□□ -1.48
CCDC12-207ENST00000494655 KTN1-AS1Q86SY8 53 aa5.66□□□□□ -1.5
CCDC12-207ENST00000494655 KRTAP5-8O75690 187 aa5.63□□□□□ -1.51
CCDC12-207ENST00000494655 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
CCDC12-207ENST00000494655 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
CCDC12-207ENST00000494655 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
CCDC12-207ENST00000494655 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
CCDC12-207ENST00000494655 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
CCDC12-207ENST00000494655 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
CCDC12-207ENST00000494655 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
CCDC12-207ENST00000494655 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
CCDC12-207ENST00000494655 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
CCDC12-207ENST00000494655 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
CCDC12-207ENST00000494655 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
CCDC12-207ENST00000494655 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
CCDC12-207ENST00000494655 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
CCDC12-207ENST00000494655 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
CCDC12-207ENST00000494655 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
CCDC12-207ENST00000494655 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
CCDC12-207ENST00000494655 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
CCDC12-207ENST00000494655 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
CCDC12-207ENST00000494655 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
CCDC12-207ENST00000494655 KRTAP21-2Q3LI59 83 aa4.08□□□□□ -1.76
CCDC12-207ENST00000494655 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
CCDC12-207ENST00000494655 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
CCDC12-207ENST00000494655 PRM1P04553 51 aa3.62□□□□□ -1.83
CCDC12-207ENST00000494655 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
CCDC12-207ENST00000494655 INE1O15225 51 aa3.43□□□□□ -1.86
CCDC12-207ENST00000494655 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
CCDC12-207ENST00000494655 H3BS24 57 aa3.41□□□□□ -1.86
CCDC12-207ENST00000494655 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
CCDC12-207ENST00000494655 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms