RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 TNP1P09430 55 aa1.2□□□□□ -2.22
MDC1-208ENST00000494654 KRTAP9-6A8MVA2 160 aa1.19□□□□□ -2.22
MDC1-208ENST00000494654 LCE3EQ5T5B0 92 aa1.18□□□□□ -2.22
MDC1-208ENST00000494654 SYNE2Q8WXH0 6885 aaKnown RBP1.17□□□□□ -2.22
MDC1-208ENST00000494654 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
MDC1-208ENST00000494654 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
MDC1-208ENST00000494654 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
MDC1-208ENST00000494654 M0R2T5 61 aa1.1□□□□□ -2.23
MDC1-208ENST00000494654 LCE3AQ5TA76 89 aa1.1□□□□□ -2.23
MDC1-208ENST00000494654 KRTAP8-1Q8IUC2 63 aa1.1□□□□□ -2.23
MDC1-208ENST00000494654 KRTAP10-10P60014 251 aa1.09□□□□□ -2.23
MDC1-208ENST00000494654 KRTAP4-4Q9BYR3 166 aa1.09□□□□□ -2.23
MDC1-208ENST00000494654 SSPOA2VEC9 5147 aa1.09□□□□□ -2.23
MDC1-208ENST00000494654 USH2AO75445 5202 aa1.09□□□□□ -2.24
MDC1-208ENST00000494654 MT1HP80294 61 aa1.08□□□□□ -2.24
MDC1-208ENST00000494654 KRTAP19-2Q3LHN2 52 aa1.08□□□□□ -2.24
MDC1-208ENST00000494654 OBSCNQ5VST9 7968 aa1.08□□□□□ -2.24
MDC1-208ENST00000494654 FCGBPQ9Y6R7 5405 aaPredicted RBP1.07□□□□□ -2.24
MDC1-208ENST00000494654 SPRR2GQ9BYE4 73 aa1.05□□□□□ -2.24
MDC1-208ENST00000494654 NEBP20929 6669 aa1.04□□□□□ -2.24
MDC1-208ENST00000494654 KRTAP5-4Q6L8H1 288 aa1.04□□□□□ -2.24
MDC1-208ENST00000494654 KRTAP12-3P60328 96 aa1.03□□□□□ -2.24
MDC1-208ENST00000494654 KRTAP20-1Q3LI63 56 aa1.03□□□□□ -2.24
MDC1-208ENST00000494654 KRTAP2-3P0C7H8 128 aa1.01□□□□□ -2.25
MDC1-208ENST00000494654 KRTAP2-4Q9BYR9 128 aa1.01□□□□□ -2.25
MDC1-208ENST00000494654 KRTAP2-1Q9BYU5 128 aa1.01□□□□□ -2.25
MDC1-208ENST00000494654 KRTAP5-9P26371 169 aa1□□□□□ -2.25
MDC1-208ENST00000494654 KRTAP19-8Q3LI54 63 aa1□□□□□ -2.25
MDC1-208ENST00000494654 KRTAP6-3Q3LI67 103 aa0.99□□□□□ -2.25
MDC1-208ENST00000494654 MUC12Q9UKN1 5478 aa0.99□□□□□ -2.25
MDC1-208ENST00000494654 MT1FP04733 61 aa0.98□□□□□ -2.25
MDC1-208ENST00000494654 MT1XP80297 61 aa0.98□□□□□ -2.25
MDC1-208ENST00000494654 MT2AP02795 61 aa0.97□□□□□ -2.25
MDC1-208ENST00000494654 LCE3DQ9BYE3 92 aa0.97□□□□□ -2.25
MDC1-208ENST00000494654 MT1BP07438 61 aa0.96□□□□□ -2.26
MDC1-208ENST00000494654 KMT2DO14686 5537 aa0.95□□□□□ -2.26
MDC1-208ENST00000494654 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
MDC1-208ENST00000494654 KRTAP4-3Q9BYR4 195 aa0.95□□□□□ -2.26
MDC1-208ENST00000494654 GPR98Q8WXG9 6306 aa0.94□□□□□ -2.26
MDC1-208ENST00000494654 KRTAP19-6Q3LI70 58 aa0.94□□□□□ -2.26
MDC1-208ENST00000494654 KRTAP5-5Q701N2 237 aaPredicted RBP0.94□□□□□ -2.26
MDC1-208ENST00000494654 MDN1Q9NU22 5596 aa0.94□□□□□ -2.26
MDC1-208ENST00000494654 SPRR2EP22531 72 aa0.92□□□□□ -2.26
MDC1-208ENST00000494654 SPRR2BP35325 72 aa0.92□□□□□ -2.26
MDC1-208ENST00000494654 SPRR2AP35326 72 aa0.92□□□□□ -2.26
MDC1-208ENST00000494654 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
MDC1-208ENST00000494654 SPRR2FQ96RM1 72 aa0.89□□□□□ -2.27
MDC1-208ENST00000494654 SPRR2DP22532 72 aa0.88□□□□□ -2.27
MDC1-208ENST00000494654 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
MDC1-208ENST00000494654 KRTAP12-4P60329 112 aa0.87□□□□□ -2.27
MDC1-208ENST00000494654 KRTAP19-7Q3SYF9 63 aa0.87□□□□□ -2.27
MDC1-208ENST00000494654 KRTAP5-2Q701N4 177 aa0.86□□□□□ -2.27
MDC1-208ENST00000494654 MT1LQ93083 61 aa0.86□□□□□ -2.27
MDC1-208ENST00000494654 MT1EP04732 61 aa0.85□□□□□ -2.27
MDC1-208ENST00000494654 MT4P47944 62 aa0.83□□□□□ -2.28
MDC1-208ENST00000494654 LCE1CQ5T751 118 aa0.83□□□□□ -2.28
MDC1-208ENST00000494654 LCE1BQ5T7P3 118 aa0.83□□□□□ -2.28
MDC1-208ENST00000494654 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
MDC1-208ENST00000494654 PRM1P04553 51 aa0.82□□□□□ -2.28
MDC1-208ENST00000494654 MT1AP04731 61 aa0.82□□□□□ -2.28
MDC1-208ENST00000494654 HMCN1Q96RW7 5635 aa0.8□□□□□ -2.28
MDC1-208ENST00000494654 MUC19Q7Z5P9 8384 aa0.79□□□□□ -2.28
MDC1-208ENST00000494654 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
MDC1-208ENST00000494654 MT1GP13640 62 aa0.78□□□□□ -2.28
MDC1-208ENST00000494654 MT1MQ8N339 61 aa0.78□□□□□ -2.28
MDC1-208ENST00000494654 KRTAP5-7Q6L8G8 165 aa0.76□□□□□ -2.29
MDC1-208ENST00000494654 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
MDC1-208ENST00000494654 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
MDC1-208ENST00000494654 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
MDC1-208ENST00000494654 KRTAP6-1Q3LI64 71 aa0.72□□□□□ -2.29
MDC1-208ENST00000494654 KRTAP5-8O75690 187 aa0.69□□□□□ -2.3
MDC1-208ENST00000494654 KRTAP20-2Q3LI61 65 aa0.67□□□□□ -2.3
MDC1-208ENST00000494654 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
MDC1-208ENST00000494654 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
MDC1-208ENST00000494654 KRTAP21-2Q3LI59 83 aa0.63□□□□□ -2.31
MDC1-208ENST00000494654 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
MDC1-208ENST00000494654 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
MDC1-208ENST00000494654 MUC16Q8WXI7 14507 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 41.6 ms