RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
PDZRN3-211ENST00000494559 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
PDZRN3-211ENST00000494559 KRTAP19-6Q3LI70 58 aa5.76□□□□□ -1.49
PDZRN3-211ENST00000494559 KMT2DO14686 5537 aa5.71□□□□□ -1.5
PDZRN3-211ENST00000494559 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
PDZRN3-211ENST00000494559 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.52
PDZRN3-211ENST00000494559 MT1EP04732 61 aa5.52□□□□□ -1.53
PDZRN3-211ENST00000494559 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
PDZRN3-211ENST00000494559 MT1LQ93083 61 aa5.47□□□□□ -1.53
PDZRN3-211ENST00000494559 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
PDZRN3-211ENST00000494559 INE1O15225 51 aa5.44□□□□□ -1.54
PDZRN3-211ENST00000494559 FCGBPQ9Y6R7 5405 aaPredicted RBP5.4□□□□□ -1.55
PDZRN3-211ENST00000494559 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
PDZRN3-211ENST00000494559 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
PDZRN3-211ENST00000494559 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
PDZRN3-211ENST00000494559 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
PDZRN3-211ENST00000494559 MT1GP13640 62 aa5.19□□□□□ -1.58
PDZRN3-211ENST00000494559 MT1MQ8N339 61 aa5.17□□□□□ -1.58
PDZRN3-211ENST00000494559 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
PDZRN3-211ENST00000494559 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
PDZRN3-211ENST00000494559 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
PDZRN3-211ENST00000494559 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
PDZRN3-211ENST00000494559 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
PDZRN3-211ENST00000494559 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
PDZRN3-211ENST00000494559 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
PDZRN3-211ENST00000494559 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
PDZRN3-211ENST00000494559 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
PDZRN3-211ENST00000494559 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.63
PDZRN3-211ENST00000494559 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
PDZRN3-211ENST00000494559 SPRR2EP22531 72 aa4.79□□□□□ -1.64
PDZRN3-211ENST00000494559 SPRR2BP35325 72 aa4.79□□□□□ -1.64
PDZRN3-211ENST00000494559 SPRR2AP35326 72 aa4.79□□□□□ -1.64
PDZRN3-211ENST00000494559 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
PDZRN3-211ENST00000494559 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
PDZRN3-211ENST00000494559 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.65
PDZRN3-211ENST00000494559 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
PDZRN3-211ENST00000494559 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
PDZRN3-211ENST00000494559 MT1AP04731 61 aa4.61□□□□□ -1.67
PDZRN3-211ENST00000494559 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
PDZRN3-211ENST00000494559 SPRR2DP22532 72 aa4.59□□□□□ -1.67
PDZRN3-211ENST00000494559 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
PDZRN3-211ENST00000494559 NEBP20929 6669 aa4.43□□□□□ -1.7
PDZRN3-211ENST00000494559 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
PDZRN3-211ENST00000494559 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
PDZRN3-211ENST00000494559 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
PDZRN3-211ENST00000494559 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
PDZRN3-211ENST00000494559 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
PDZRN3-211ENST00000494559 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
PDZRN3-211ENST00000494559 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
PDZRN3-211ENST00000494559 MT3P25713 68 aa4.15□□□□□ -1.74
PDZRN3-211ENST00000494559 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.74
PDZRN3-211ENST00000494559 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
PDZRN3-211ENST00000494559 MT4P47944 62 aa4.01□□□□□ -1.77
PDZRN3-211ENST00000494559 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.77
PDZRN3-211ENST00000494559 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
PDZRN3-211ENST00000494559 PRM1P04553 51 aa3.81□□□□□ -1.8
PDZRN3-211ENST00000494559 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
PDZRN3-211ENST00000494559 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
PDZRN3-211ENST00000494559 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
PDZRN3-211ENST00000494559 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
PDZRN3-211ENST00000494559 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
PDZRN3-211ENST00000494559 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
PDZRN3-211ENST00000494559 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
PDZRN3-211ENST00000494559 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
PDZRN3-211ENST00000494559 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
PDZRN3-211ENST00000494559 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.88
PDZRN3-211ENST00000494559 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
PDZRN3-211ENST00000494559 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
PDZRN3-211ENST00000494559 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
PDZRN3-211ENST00000494559 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
PDZRN3-211ENST00000494559 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
PDZRN3-211ENST00000494559 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
PDZRN3-211ENST00000494559 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
PDZRN3-211ENST00000494559 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -2
PDZRN3-211ENST00000494559 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
PDZRN3-211ENST00000494559 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
PDZRN3-211ENST00000494559 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
PDZRN3-211ENST00000494559 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 60.5 ms