RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 KRTAP4-8Q9BYQ9 185 aa2.98□□□□□ -1.93
RAF1-212ENST00000494557 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
RAF1-212ENST00000494557 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.94
RAF1-212ENST00000494557 KMT2DO14686 5537 aa2.89□□□□□ -1.95
RAF1-212ENST00000494557 CRCT1Q9UGL9 99 aa2.87□□□□□ -1.95
RAF1-212ENST00000494557 LCE5AQ5TCM9 118 aa2.84□□□□□ -1.96
RAF1-212ENST00000494557 MT1GP13640 62 aa2.83□□□□□ -1.96
RAF1-212ENST00000494557 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
RAF1-212ENST00000494557 MT1MQ8N339 61 aa2.82□□□□□ -1.96
RAF1-212ENST00000494557 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
RAF1-212ENST00000494557 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
RAF1-212ENST00000494557 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.96
RAF1-212ENST00000494557 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
RAF1-212ENST00000494557 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
RAF1-212ENST00000494557 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
RAF1-212ENST00000494557 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
RAF1-212ENST00000494557 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
RAF1-212ENST00000494557 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
RAF1-212ENST00000494557 KRTAP9-7A8MTY7 169 aa2.73□□□□□ -1.97
RAF1-212ENST00000494557 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
RAF1-212ENST00000494557 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
RAF1-212ENST00000494557 MT1AP04731 61 aa2.65□□□□□ -1.98
RAF1-212ENST00000494557 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
RAF1-212ENST00000494557 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
RAF1-212ENST00000494557 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
RAF1-212ENST00000494557 LCE1DQ5T752 114 aa2.61□□□□□ -1.99
RAF1-212ENST00000494557 MUC12Q9UKN1 5478 aa2.56□□□□□ -2
RAF1-212ENST00000494557 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
RAF1-212ENST00000494557 SPRR2FQ96RM1 72 aa2.52□□□□□ -2.01
RAF1-212ENST00000494557 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
RAF1-212ENST00000494557 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
RAF1-212ENST00000494557 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
RAF1-212ENST00000494557 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
RAF1-212ENST00000494557 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
RAF1-212ENST00000494557 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
RAF1-212ENST00000494557 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
RAF1-212ENST00000494557 NEBP20929 6669 aa2.39□□□□□ -2.03
RAF1-212ENST00000494557 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
RAF1-212ENST00000494557 SPRR2EP22531 72 aa2.34□□□□□ -2.03
RAF1-212ENST00000494557 SPRR2BP35325 72 aa2.34□□□□□ -2.03
RAF1-212ENST00000494557 SPRR2AP35326 72 aa2.34□□□□□ -2.03
RAF1-212ENST00000494557 SYNE2Q8WXH0 6885 aaKnown RBP2.32□□□□□ -2.04
RAF1-212ENST00000494557 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
RAF1-212ENST00000494557 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
RAF1-212ENST00000494557 LCE3BQ5TA77 95 aa2.3□□□□□ -2.04
RAF1-212ENST00000494557 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
RAF1-212ENST00000494557 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
RAF1-212ENST00000494557 MT3P25713 68 aa2.29□□□□□ -2.04
RAF1-212ENST00000494557 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
RAF1-212ENST00000494557 SPRR2DP22532 72 aa2.27□□□□□ -2.05
RAF1-212ENST00000494557 KRTAP4-9Q9BYQ8 210 aa2.23□□□□□ -2.05
RAF1-212ENST00000494557 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
RAF1-212ENST00000494557 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
RAF1-212ENST00000494557 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
RAF1-212ENST00000494557 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
RAF1-212ENST00000494557 PRM1P04553 51 aa2.16□□□□□ -2.06
RAF1-212ENST00000494557 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
RAF1-212ENST00000494557 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
RAF1-212ENST00000494557 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
RAF1-212ENST00000494557 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
RAF1-212ENST00000494557 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
RAF1-212ENST00000494557 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
RAF1-212ENST00000494557 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
RAF1-212ENST00000494557 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
RAF1-212ENST00000494557 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
RAF1-212ENST00000494557 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
RAF1-212ENST00000494557 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
RAF1-212ENST00000494557 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
RAF1-212ENST00000494557 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
RAF1-212ENST00000494557 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
RAF1-212ENST00000494557 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
RAF1-212ENST00000494557 MT4P47944 62 aa1.84□□□□□ -2.12
RAF1-212ENST00000494557 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
RAF1-212ENST00000494557 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
RAF1-212ENST00000494557 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
RAF1-212ENST00000494557 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
RAF1-212ENST00000494557 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
RAF1-212ENST00000494557 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms