RNA–Protein interactions for RNA: ENST00000494276.1

ZNF561-219, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-219ENST00000494276 VPS13CQ709C8 3753 aa0.88□□□□□ -2.27
ZNF561-219ENST00000494276 DNAH17Q9UFH2 4485 aa0.87□□□□□ -2.27
ZNF561-219ENST00000494276 SPRR2DP22532 72 aa0.87□□□□□ -2.27
ZNF561-219ENST00000494276 SPRR2BP35325 72 aa0.87□□□□□ -2.27
ZNF561-219ENST00000494276 APOBP04114 4563 aaKnown RBP0.87□□□□□ -2.27
ZNF561-219ENST00000494276 PKHD1L1Q86WI1 4243 aa0.87□□□□□ -2.27
ZNF561-219ENST00000494276 SPRR2AP35326 72 aa0.86□□□□□ -2.27
ZNF561-219ENST00000494276 MYO15AQ9UKN7 3530 aa0.85□□□□□ -2.27
ZNF561-219ENST00000494276 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
ZNF561-219ENST00000494276 MT1EP04732 61 aa0.84□□□□□ -2.27
ZNF561-219ENST00000494276 KRTAP6-2Q3LI66 62 aa0.83□□□□□ -2.28
ZNF561-219ENST00000494276 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
ZNF561-219ENST00000494276 DNAH5Q8TE73 4624 aa0.83□□□□□ -2.28
ZNF561-219ENST00000494276 PLECQ15149 4684 aaKnown RBP0.83□□□□□ -2.28
ZNF561-219ENST00000494276 MT1LQ93083 61 aa0.82□□□□□ -2.28
ZNF561-219ENST00000494276 SPRR2FQ96RM1 72 aa0.82□□□□□ -2.28
ZNF561-219ENST00000494276 LPAP08519 4548 aa0.82□□□□□ -2.28
ZNF561-219ENST00000494276 LRP1Q07954 4544 aaKnown RBP0.81□□□□□ -2.28
ZNF561-219ENST00000494276 DYNC1H1Q14204 4646 aaKnown RBP0.8□□□□□ -2.28
ZNF561-219ENST00000494276 CDH23Q9H251 3354 aa0.8□□□□□ -2.28
ZNF561-219ENST00000494276 SPRR2EP22531 72 aa0.79□□□□□ -2.28
ZNF561-219ENST00000494276 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
ZNF561-219ENST00000494276 PKHD1P08F94 4074 aa0.78□□□□□ -2.29
ZNF561-219ENST00000494276 MT1HP80294 61 aa0.77□□□□□ -2.29
ZNF561-219ENST00000494276 FAT1Q14517 4588 aa0.77□□□□□ -2.29
ZNF561-219ENST00000494276 MT1XP80297 61 aa0.76□□□□□ -2.29
ZNF561-219ENST00000494276 MUC17Q685J3 4493 aa0.72□□□□□ -2.29
ZNF561-219ENST00000494276 STARD9Q9P2P6 4700 aa0.72□□□□□ -2.29
ZNF561-219ENST00000494276 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
ZNF561-219ENST00000494276 KRTAP19-2Q3LHN2 52 aa0.68□□□□□ -2.3
ZNF561-219ENST00000494276 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
ZNF561-219ENST00000494276 HERC1Q15751 4861 aa0.66□□□□□ -2.3
ZNF561-219ENST00000494276 MT1BP07438 61 aa0.66□□□□□ -2.3
ZNF561-219ENST00000494276 MT1GP13640 62 aa0.66□□□□□ -2.3
ZNF561-219ENST00000494276 KRTAP19-7Q3SYF9 63 aa0.66□□□□□ -2.3
ZNF561-219ENST00000494276 LRP1BQ9NZR2 4599 aa0.65□□□□□ -2.31
ZNF561-219ENST00000494276 MT2AP02795 61 aa0.64□□□□□ -2.31
ZNF561-219ENST00000494276 MT1MQ8N339 61 aa0.62□□□□□ -2.31
ZNF561-219ENST00000494276 LRP2P98164 4655 aa0.61□□□□□ -2.31
ZNF561-219ENST00000494276 MT1HL1P0DM35 61 aa0.61□□□□□ -2.31
ZNF561-219ENST00000494276 MACF1Q9UPN3 7388 aaKnown RBP0.59□□□□□ -2.31
ZNF561-219ENST00000494276 UBR4Q5T4S7 5183 aa0.59□□□□□ -2.32
ZNF561-219ENST00000494276 GPR98Q8WXG9 6306 aa0.58□□□□□ -2.32
ZNF561-219ENST00000494276 MT1FP04733 61 aa0.57□□□□□ -2.32
ZNF561-219ENST00000494276 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
ZNF561-219ENST00000494276 MUC2Q02817 5179 aa0.55□□□□□ -2.32
ZNF561-219ENST00000494276 MDN1Q9NU22 5596 aa0.53□□□□□ -2.32
ZNF561-219ENST00000494276 KIAA1109Q2LD37 5005 aa0.52□□□□□ -2.33
ZNF561-219ENST00000494276 DSTQ03001 7570 aaKnown RBP0.51□□□□□ -2.33
ZNF561-219ENST00000494276 HMCN2Q8NDA2 5059 aa0.5□□□□□ -2.33
ZNF561-219ENST00000494276 HYDINQ4G0P3 5121 aa0.5□□□□□ -2.33
ZNF561-219ENST00000494276 KMT2CQ8NEZ4 4911 aaKnown RBP0.49□□□□□ -2.33
ZNF561-219ENST00000494276 PCLOQ9Y6V0 5065 aa0.48□□□□□ -2.33
ZNF561-219ENST00000494276 SYNE2Q8WXH0 6885 aaKnown RBP0.48□□□□□ -2.33
ZNF561-219ENST00000494276 USH2AO75445 5202 aa0.48□□□□□ -2.33
ZNF561-219ENST00000494276 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
ZNF561-219ENST00000494276 HERC2O95714 4834 aa0.47□□□□□ -2.33
ZNF561-219ENST00000494276 FSIP2Q5CZC0 6907 aa0.47□□□□□ -2.33
ZNF561-219ENST00000494276 DNHD1Q96M86 4753 aa0.46□□□□□ -2.34
ZNF561-219ENST00000494276 KRTAP20-1Q3LI63 56 aa0.46□□□□□ -2.34
ZNF561-219ENST00000494276 SSPOA2VEC9 5147 aa0.45□□□□□ -2.34
ZNF561-219ENST00000494276 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
ZNF561-219ENST00000494276 RYR1P21817 5038 aa0.44□□□□□ -2.34
ZNF561-219ENST00000494276 RYR2Q92736 4967 aa0.44□□□□□ -2.34
ZNF561-219ENST00000494276 NEBP20929 6669 aa0.44□□□□□ -2.34
ZNF561-219ENST00000494276 RYR3Q15413 4870 aa0.43□□□□□ -2.34
ZNF561-219ENST00000494276 BIRC6Q9NR09 4857 aa0.41□□□□□ -2.34
ZNF561-219ENST00000494276 FAT4Q6V0I7 4981 aa0.41□□□□□ -2.34
ZNF561-219ENST00000494276 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
ZNF561-219ENST00000494276 EPPK1P58107 5090 aaKnown RBP0.39□□□□□ -2.35
ZNF561-219ENST00000494276 ABCA13Q86UQ4 5058 aa0.38□□□□□ -2.35
ZNF561-219ENST00000494276 KMT2DO14686 5537 aa0.36□□□□□ -2.35
ZNF561-219ENST00000494276 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
ZNF561-219ENST00000494276 RNF213Q63HN8 5207 aa0.33□□□□□ -2.36
ZNF561-219ENST00000494276 MUC12Q9UKN1 5478 aa0.26□□□□□ -2.37
ZNF561-219ENST00000494276 MT4P47944 62 aa0.26□□□□□ -2.37
ZNF561-219ENST00000494276 KRTAP19-6Q3LI70 58 aa0.26□□□□□ -2.37
ZNF561-219ENST00000494276 KRTAP20-2Q3LI61 65 aa0.24□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 168.7 ms