RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 COX7CP15954 63 aa8.25□□□□□ -1.09
TTC3-224ENST00000494243 TNP1P09430 55 aa8.19□□□□□ -1.1
TTC3-224ENST00000494243 KRTAP5-10Q6L8G5 202 aa8.19□□□□□ -1.1
TTC3-224ENST00000494243 A0A1B0GU69 56 aa8.18□□□□□ -1.1
TTC3-224ENST00000494243 AHNAK2Q8IVF2 5795 aa8.16□□□□□ -1.1
TTC3-224ENST00000494243 KRTAP4-7Q9BYR0 210 aa8.08□□□□□ -1.12
TTC3-224ENST00000494243 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
TTC3-224ENST00000494243 KRTAP12-3P60328 96 aa7.98□□□□□ -1.13
TTC3-224ENST00000494243 KRTAP5-3Q6L8H2 238 aa7.92□□□□□ -1.14
TTC3-224ENST00000494243 KRTAP5-7Q6L8G8 165 aa7.9□□□□□ -1.14
TTC3-224ENST00000494243 KRTAP4-12Q9BQ66 201 aa7.9□□□□□ -1.14
TTC3-224ENST00000494243 KRTAP20-2Q3LI61 65 aa7.87□□□□□ -1.15
TTC3-224ENST00000494243 KRTAP5-5Q701N2 237 aaPredicted RBP7.87□□□□□ -1.15
TTC3-224ENST00000494243 PRR15LQ9BU68 103 aa7.8□□□□□ -1.16
TTC3-224ENST00000494243 SPRR5A0A1B0GTR4 108 aa7.79□□□□□ -1.16
TTC3-224ENST00000494243 ANAPC13Q9BS18 74 aa7.72□□□□□ -1.17
TTC3-224ENST00000494243 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.18
TTC3-224ENST00000494243 KRTAP12-4P60329 112 aa7.69□□□□□ -1.18
TTC3-224ENST00000494243 CCDC179H3BU77 68 aa7.65□□□□□ -1.18
TTC3-224ENST00000494243 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
TTC3-224ENST00000494243 UQCR11O14957 56 aa7.57□□□□□ -1.2
TTC3-224ENST00000494243 KRTAP25-1Q3LHN0 102 aa7.57□□□□□ -1.2
TTC3-224ENST00000494243 SYNE1Q8NF91 8797 aaKnown RBP7.54□□□□□ -1.2
TTC3-224ENST00000494243 KRTAP9-9Q9BYP9 154 aa7.48□□□□□ -1.21
TTC3-224ENST00000494243 KRTAP9-4Q9BYQ2 154 aa7.48□□□□□ -1.21
TTC3-224ENST00000494243 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
TTC3-224ENST00000494243 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
TTC3-224ENST00000494243 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
TTC3-224ENST00000494243 LCE3CQ5T5A8 94 aa7.32□□□□□ -1.24
TTC3-224ENST00000494243 TMEM258P61165 79 aa7.28□□□□□ -1.24
TTC3-224ENST00000494243 KRTAP4-11Q9BYQ6 195 aa7.27□□□□□ -1.25
TTC3-224ENST00000494243 KRTAP5-2Q701N4 177 aa7.25□□□□□ -1.25
TTC3-224ENST00000494243 K7ERS5 55 aa7.24□□□□□ -1.25
TTC3-224ENST00000494243 MT1AP04731 61 aa7.2□□□□□ -1.26
TTC3-224ENST00000494243 KRTAP6-1Q3LI64 71 aa7.2□□□□□ -1.26
TTC3-224ENST00000494243 PSPHP1O15172 72 aa7.05□□□□□ -1.28
TTC3-224ENST00000494243 KRTAP5-8O75690 187 aa7.05□□□□□ -1.28
TTC3-224ENST00000494243 KRTAP9-6A8MVA2 160 aa6.97□□□□□ -1.29
TTC3-224ENST00000494243 V9GYY9 64 aa6.95□□□□□ -1.3
TTC3-224ENST00000494243 Q1T7F1 81 aa6.93□□□□□ -1.3
TTC3-224ENST00000494243 KRTAP6-2Q3LI66 62 aa6.93□□□□□ -1.3
TTC3-224ENST00000494243 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
TTC3-224ENST00000494243 MUC5ACP98088 5654 aa6.81□□□□□ -1.32
TTC3-224ENST00000494243 OBSCNQ5VST9 7968 aa6.8□□□□□ -1.32
TTC3-224ENST00000494243 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
TTC3-224ENST00000494243 A6NED7 52 aa6.75□□□□□ -1.33
TTC3-224ENST00000494243 AHNAKQ09666 5890 aaKnown RBP6.74□□□□□ -1.33
TTC3-224ENST00000494243 ROMO1P60602 79 aa6.74□□□□□ -1.33
TTC3-224ENST00000494243 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
TTC3-224ENST00000494243 MUC5BQ9HC84 5762 aaPredicted RBP6.73□□□□□ -1.33
TTC3-224ENST00000494243 KRTAP4-2Q9BYR5 136 aa6.67□□□□□ -1.34
TTC3-224ENST00000494243 MT3P25713 68 aa6.59□□□□□ -1.35
TTC3-224ENST00000494243 KRTAP5-1Q6L8H4 278 aa6.57□□□□□ -1.36
TTC3-224ENST00000494243 PCP4P48539 62 aa6.32□□□□□ -1.4
TTC3-224ENST00000494243 LCE1EQ5T753 118 aa6.14□□□□□ -1.43
TTC3-224ENST00000494243 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
TTC3-224ENST00000494243 LCE1BQ5T7P3 118 aa5.8□□□□□ -1.48
TTC3-224ENST00000494243 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
TTC3-224ENST00000494243 BRK1Q8WUW1 75 aa5.33□□□□□ -1.56
TTC3-224ENST00000494243 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
TTC3-224ENST00000494243 KRTAP5-11Q6L8G4 156 aa5.19□□□□□ -1.58
TTC3-224ENST00000494243 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
TTC3-224ENST00000494243 LCE1FQ5T754 118 aa5.12□□□□□ -1.59
TTC3-224ENST00000494243 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
TTC3-224ENST00000494243 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
TTC3-224ENST00000494243 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
TTC3-224ENST00000494243 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
TTC3-224ENST00000494243 PHGR1C9JFL3 82 aa4.76□□□□□ -1.65
TTC3-224ENST00000494243 KRTAP21-2Q3LI59 83 aa4.76□□□□□ -1.65
TTC3-224ENST00000494243 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
TTC3-224ENST00000494243 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
TTC3-224ENST00000494243 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
TTC3-224ENST00000494243 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
TTC3-224ENST00000494243 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
TTC3-224ENST00000494243 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
TTC3-224ENST00000494243 PRM1P04553 51 aa3.43□□□□□ -1.86
TTC3-224ENST00000494243 MUC16Q8WXI7 14507 aa2.96□□□□□ -1.93
TTC3-224ENST00000494243 INE1O15225 51 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 8.8 ms