RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 MT2AP02795 61 aa4.38□□□□□ -1.71
PRPF3-206ENST00000493553 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
PRPF3-206ENST00000493553 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
PRPF3-206ENST00000493553 UBR4Q5T4S7 5183 aa4.35□□□□□ -1.71
PRPF3-206ENST00000493553 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
PRPF3-206ENST00000493553 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
PRPF3-206ENST00000493553 MT1FP04733 61 aa4.32□□□□□ -1.72
PRPF3-206ENST00000493553 TNP1P09430 55 aa4.31□□□□□ -1.72
PRPF3-206ENST00000493553 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
PRPF3-206ENST00000493553 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
PRPF3-206ENST00000493553 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
PRPF3-206ENST00000493553 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
PRPF3-206ENST00000493553 MT1BP07438 61 aa4.14□□□□□ -1.75
PRPF3-206ENST00000493553 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
PRPF3-206ENST00000493553 MT1XP80297 61 aa4.05□□□□□ -1.76
PRPF3-206ENST00000493553 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
PRPF3-206ENST00000493553 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
PRPF3-206ENST00000493553 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
PRPF3-206ENST00000493553 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
PRPF3-206ENST00000493553 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
PRPF3-206ENST00000493553 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
PRPF3-206ENST00000493553 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
PRPF3-206ENST00000493553 USH2AO75445 5202 aa3.75□□□□□ -1.81
PRPF3-206ENST00000493553 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
PRPF3-206ENST00000493553 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
PRPF3-206ENST00000493553 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
PRPF3-206ENST00000493553 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
PRPF3-206ENST00000493553 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
PRPF3-206ENST00000493553 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
PRPF3-206ENST00000493553 MT1EP04732 61 aa3.57□□□□□ -1.84
PRPF3-206ENST00000493553 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
PRPF3-206ENST00000493553 MT1LQ93083 61 aa3.53□□□□□ -1.84
PRPF3-206ENST00000493553 MT1GP13640 62 aa3.46□□□□□ -1.86
PRPF3-206ENST00000493553 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
PRPF3-206ENST00000493553 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
PRPF3-206ENST00000493553 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
PRPF3-206ENST00000493553 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
PRPF3-206ENST00000493553 KMT2DO14686 5537 aa3.38□□□□□ -1.87
PRPF3-206ENST00000493553 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
PRPF3-206ENST00000493553 MT1MQ8N339 61 aa3.34□□□□□ -1.87
PRPF3-206ENST00000493553 INE1O15225 51 aa3.28□□□□□ -1.88
PRPF3-206ENST00000493553 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
PRPF3-206ENST00000493553 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
PRPF3-206ENST00000493553 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
PRPF3-206ENST00000493553 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
PRPF3-206ENST00000493553 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
PRPF3-206ENST00000493553 SPRR2EP22531 72 aa3.17□□□□□ -1.9
PRPF3-206ENST00000493553 SPRR2BP35325 72 aa3.17□□□□□ -1.9
PRPF3-206ENST00000493553 SPRR2AP35326 72 aa3.17□□□□□ -1.9
PRPF3-206ENST00000493553 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
PRPF3-206ENST00000493553 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.92
PRPF3-206ENST00000493553 SPRR2DP22532 72 aa3.07□□□□□ -1.92
PRPF3-206ENST00000493553 MT1AP04731 61 aa3.03□□□□□ -1.92
PRPF3-206ENST00000493553 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
PRPF3-206ENST00000493553 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
PRPF3-206ENST00000493553 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
PRPF3-206ENST00000493553 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
PRPF3-206ENST00000493553 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
PRPF3-206ENST00000493553 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
PRPF3-206ENST00000493553 NEBP20929 6669 aa2.91□□□□□ -1.94
PRPF3-206ENST00000493553 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
PRPF3-206ENST00000493553 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
PRPF3-206ENST00000493553 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
PRPF3-206ENST00000493553 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
PRPF3-206ENST00000493553 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
PRPF3-206ENST00000493553 MT4P47944 62 aa2.59□□□□□ -1.99
PRPF3-206ENST00000493553 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
PRPF3-206ENST00000493553 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
PRPF3-206ENST00000493553 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
PRPF3-206ENST00000493553 PRM1P04553 51 aa2.37□□□□□ -2.03
PRPF3-206ENST00000493553 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
PRPF3-206ENST00000493553 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
PRPF3-206ENST00000493553 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
PRPF3-206ENST00000493553 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
PRPF3-206ENST00000493553 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
PRPF3-206ENST00000493553 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
PRPF3-206ENST00000493553 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PRPF3-206ENST00000493553 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 42.7 ms