RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 MT1LQ93083 61 aa1.47□□□□□ -2.17
CLIP4-212ENST00000493551 LINC00208Q96KT6 92 aa1.46□□□□□ -2.18
CLIP4-212ENST00000493551 UQCRQO14949 82 aa1.44□□□□□ -2.18
CLIP4-212ENST00000493551 HIST1H4AP62805 103 aaKnown RBP1.44□□□□□ -2.18
CLIP4-212ENST00000493551 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
CLIP4-212ENST00000493551 ATOX1O00244 68 aa1.43□□□□□ -2.18
CLIP4-212ENST00000493551 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
CLIP4-212ENST00000493551 TAX1BP3O14907 124 aa1.42□□□□□ -2.18
CLIP4-212ENST00000493551 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
CLIP4-212ENST00000493551 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CLIP4-212ENST00000493551 C10orf95Q9H7T3 257 aa1.41□□□□□ -2.18
CLIP4-212ENST00000493551 V9GYY9 64 aa1.41□□□□□ -2.18
CLIP4-212ENST00000493551 DMAC1Q96GE9 116 aa1.39□□□□□ -2.19
CLIP4-212ENST00000493551 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
CLIP4-212ENST00000493551 TRAV7A0A075B6U4 112 aa1.38□□□□□ -2.19
CLIP4-212ENST00000493551 MP68P56378 58 aa1.38□□□□□ -2.19
CLIP4-212ENST00000493551 SPINT4Q6UDR6 99 aa1.38□□□□□ -2.19
CLIP4-212ENST00000493551 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
CLIP4-212ENST00000493551 CHKB-CPT1BH3BT56 60 aa1.36□□□□□ -2.19
CLIP4-212ENST00000493551 ETDBQ3ZM63 59 aa1.35□□□□□ -2.19
CLIP4-212ENST00000493551 SPATA8Q6RVD6 105 aa1.34□□□□□ -2.19
CLIP4-212ENST00000493551 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
CLIP4-212ENST00000493551 FAM240AA0A1B0GVK7 77 aa1.33□□□□□ -2.2
CLIP4-212ENST00000493551 SMIM26A0A096LP01 95 aa1.32□□□□□ -2.2
CLIP4-212ENST00000493551 ACYP2P14621 99 aa1.32□□□□□ -2.2
CLIP4-212ENST00000493551 ATP5EP2Q5VTU8 51 aa1.31□□□□□ -2.2
CLIP4-212ENST00000493551 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
CLIP4-212ENST00000493551 SMIM6P0DI80 62 aa1.29□□□□□ -2.2
CLIP4-212ENST00000493551 TNP1P09430 55 aa1.28□□□□□ -2.2
CLIP4-212ENST00000493551 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
CLIP4-212ENST00000493551 H3BPC8 53 aa1.27□□□□□ -2.21
CLIP4-212ENST00000493551 PSPHP1O15172 72 aa1.27□□□□□ -2.21
CLIP4-212ENST00000493551 SCGB1A1P11684 91 aa1.27□□□□□ -2.21
CLIP4-212ENST00000493551 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
CLIP4-212ENST00000493551 COL5A1-AS1Q5SY13 56 aa1.27□□□□□ -2.21
CLIP4-212ENST00000493551 GTF2H5Q6ZYL4 71 aa1.27□□□□□ -2.21
CLIP4-212ENST00000493551 PRO0628Q9UI54 55 aa1.27□□□□□ -2.21
CLIP4-212ENST00000493551 F8W1H4 67 aa1.26□□□□□ -2.21
CLIP4-212ENST00000493551 LINC00643Q86TS7 51 aa1.25□□□□□ -2.21
CLIP4-212ENST00000493551 SERP1Q9Y6X1 66 aa1.24□□□□□ -2.21
CLIP4-212ENST00000493551 A0A1B0GU33 70 aa1.23□□□□□ -2.21
CLIP4-212ENST00000493551 MT1AP04731 61 aa1.23□□□□□ -2.21
CLIP4-212ENST00000493551 ANAPC13Q9BS18 74 aa1.23□□□□□ -2.21
CLIP4-212ENST00000493551 SNURFQ9Y675 71 aa1.23□□□□□ -2.21
CLIP4-212ENST00000493551 LUZP6Q538Z0 58 aa1.21□□□□□ -2.22
CLIP4-212ENST00000493551 COA5Q86WW8 74 aa1.19□□□□□ -2.22
CLIP4-212ENST00000493551 KRTAP25-1Q3LHN0 102 aa1.18□□□□□ -2.22
CLIP4-212ENST00000493551 LOC105371267A0A1B0GV96 52 aa1.16□□□□□ -2.22
CLIP4-212ENST00000493551 K7ERS5 55 aa1.16□□□□□ -2.22
CLIP4-212ENST00000493551 PMAIP1Q13794 54 aa1.16□□□□□ -2.22
CLIP4-212ENST00000493551 SERP2Q8N6R1 65 aa1.16□□□□□ -2.22
CLIP4-212ENST00000493551 SPANXA2-OT1Q8N9U9 137 aa1.15□□□□□ -2.23
CLIP4-212ENST00000493551 A6NED7 52 aa1.14□□□□□ -2.23
CLIP4-212ENST00000493551 A0A1B0GU69 56 aa1.13□□□□□ -2.23
CLIP4-212ENST00000493551 SMIM20Q8N5G0 67 aa1.1□□□□□ -2.23
CLIP4-212ENST00000493551 A0A1B0GV90 55 aa1.06□□□□□ -2.24
CLIP4-212ENST00000493551 J3QR89 54 aa1.05□□□□□ -2.24
CLIP4-212ENST00000493551 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
CLIP4-212ENST00000493551 H7BZZ5 65 aa1.02□□□□□ -2.25
CLIP4-212ENST00000493551 PRR15LQ9BU68 103 aa1.02□□□□□ -2.25
CLIP4-212ENST00000493551 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
CLIP4-212ENST00000493551 KTN1-AS1Q86SY8 53 aa1.01□□□□□ -2.25
CLIP4-212ENST00000493551 RPS28P62857 69 aaKnown RBP0.98□□□□□ -2.25
CLIP4-212ENST00000493551 TMEM258P61165 79 aa0.96□□□□□ -2.26
CLIP4-212ENST00000493551 UQCR11O14957 56 aa0.95□□□□□ -2.26
CLIP4-212ENST00000493551 MIR22HGQ0VDD5 57 aa0.95□□□□□ -2.26
CLIP4-212ENST00000493551 COX7CP15954 63 aa0.94□□□□□ -2.26
CLIP4-212ENST00000493551 BRK1Q8WUW1 75 aa0.93□□□□□ -2.26
CLIP4-212ENST00000493551 LINC01558Q9Y6Z2 57 aa0.93□□□□□ -2.26
CLIP4-212ENST00000493551 K7ERU9 68 aa0.91□□□□□ -2.26
CLIP4-212ENST00000493551 ROMO1P60602 79 aa0.91□□□□□ -2.26
CLIP4-212ENST00000493551 Q1T7F1 81 aa0.89□□□□□ -2.27
CLIP4-212ENST00000493551 CDC42SE1Q9NRR8 79 aa0.88□□□□□ -2.27
CLIP4-212ENST00000493551 CCDC179H3BU77 68 aa0.85□□□□□ -2.27
CLIP4-212ENST00000493551 ATP5EP56381 51 aaPredicted RBP0.8□□□□□ -2.28
CLIP4-212ENST00000493551 INE1O15225 51 aa0.78□□□□□ -2.28
CLIP4-212ENST00000493551 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
CLIP4-212ENST00000493551 PRM1P04553 51 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 66.5 ms