RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
NCKAP1-207ENST00000493359 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
NCKAP1-207ENST00000493359 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
NCKAP1-207ENST00000493359 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
NCKAP1-207ENST00000493359 KTN1-AS1Q86SY8 53 aa2.94□□□□□ -1.94
NCKAP1-207ENST00000493359 ROMO1P60602 79 aa2.93□□□□□ -1.94
NCKAP1-207ENST00000493359 KRTAP19-8Q3LI54 63 aa2.89□□□□□ -1.95
NCKAP1-207ENST00000493359 MT1BP07438 61 aa2.84□□□□□ -1.95
NCKAP1-207ENST00000493359 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
NCKAP1-207ENST00000493359 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
NCKAP1-207ENST00000493359 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
NCKAP1-207ENST00000493359 TNP1P09430 55 aa2.79□□□□□ -1.96
NCKAP1-207ENST00000493359 MT1XP80297 61 aa2.75□□□□□ -1.97
NCKAP1-207ENST00000493359 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
NCKAP1-207ENST00000493359 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
NCKAP1-207ENST00000493359 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
NCKAP1-207ENST00000493359 KRTAP19-6Q3LI70 58 aa2.67□□□□□ -1.98
NCKAP1-207ENST00000493359 USH2AO75445 5202 aa2.65□□□□□ -1.98
NCKAP1-207ENST00000493359 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
NCKAP1-207ENST00000493359 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
NCKAP1-207ENST00000493359 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
NCKAP1-207ENST00000493359 SSPOA2VEC9 5147 aa2.58□□□□□ -2
NCKAP1-207ENST00000493359 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
NCKAP1-207ENST00000493359 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
NCKAP1-207ENST00000493359 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
NCKAP1-207ENST00000493359 KRTAP12-3P60328 96 aa2.54□□□□□ -2
NCKAP1-207ENST00000493359 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
NCKAP1-207ENST00000493359 FSIP2Q5CZC0 6907 aa2.46□□□□□ -2.02
NCKAP1-207ENST00000493359 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
NCKAP1-207ENST00000493359 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
NCKAP1-207ENST00000493359 MT1EP04732 61 aa2.42□□□□□ -2.02
NCKAP1-207ENST00000493359 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
NCKAP1-207ENST00000493359 MT1LQ93083 61 aa2.38□□□□□ -2.03
NCKAP1-207ENST00000493359 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
NCKAP1-207ENST00000493359 KMT2DO14686 5537 aa2.36□□□□□ -2.03
NCKAP1-207ENST00000493359 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
NCKAP1-207ENST00000493359 MT1GP13640 62 aa2.31□□□□□ -2.04
NCKAP1-207ENST00000493359 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
NCKAP1-207ENST00000493359 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
NCKAP1-207ENST00000493359 SPRR2EP22531 72 aa2.29□□□□□ -2.04
NCKAP1-207ENST00000493359 SPRR2BP35325 72 aa2.29□□□□□ -2.04
NCKAP1-207ENST00000493359 SPRR2AP35326 72 aa2.29□□□□□ -2.04
NCKAP1-207ENST00000493359 MT1MQ8N339 61 aa2.29□□□□□ -2.04
NCKAP1-207ENST00000493359 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
NCKAP1-207ENST00000493359 SPRR2DP22532 72 aa2.21□□□□□ -2.06
NCKAP1-207ENST00000493359 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
NCKAP1-207ENST00000493359 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
NCKAP1-207ENST00000493359 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
NCKAP1-207ENST00000493359 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
NCKAP1-207ENST00000493359 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
NCKAP1-207ENST00000493359 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
NCKAP1-207ENST00000493359 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
NCKAP1-207ENST00000493359 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
NCKAP1-207ENST00000493359 NEBP20929 6669 aa2.03□□□□□ -2.08
NCKAP1-207ENST00000493359 MT1AP04731 61 aa2.03□□□□□ -2.08
NCKAP1-207ENST00000493359 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
NCKAP1-207ENST00000493359 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
NCKAP1-207ENST00000493359 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
NCKAP1-207ENST00000493359 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
NCKAP1-207ENST00000493359 INE1O15225 51 aa1.91□□□□□ -2.1
NCKAP1-207ENST00000493359 MT4P47944 62 aa1.9□□□□□ -2.11
NCKAP1-207ENST00000493359 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
NCKAP1-207ENST00000493359 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.11
NCKAP1-207ENST00000493359 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
NCKAP1-207ENST00000493359 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
NCKAP1-207ENST00000493359 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
NCKAP1-207ENST00000493359 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
NCKAP1-207ENST00000493359 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
NCKAP1-207ENST00000493359 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
NCKAP1-207ENST00000493359 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
NCKAP1-207ENST00000493359 PRM1P04553 51 aa1.52□□□□□ -2.17
NCKAP1-207ENST00000493359 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
NCKAP1-207ENST00000493359 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
NCKAP1-207ENST00000493359 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
NCKAP1-207ENST00000493359 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
NCKAP1-207ENST00000493359 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
NCKAP1-207ENST00000493359 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
NCKAP1-207ENST00000493359 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms