RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
KLF4-204ENST00000493306 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
KLF4-204ENST00000493306 MT1GP13640 62 aa5.22□□□□□ -1.57
KLF4-204ENST00000493306 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
KLF4-204ENST00000493306 LCE2DQ5TA82 110 aaPredicted RBP5.2□□□□□ -1.58
KLF4-204ENST00000493306 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
KLF4-204ENST00000493306 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
KLF4-204ENST00000493306 MT1MQ8N339 61 aa5.1□□□□□ -1.59
KLF4-204ENST00000493306 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
KLF4-204ENST00000493306 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
KLF4-204ENST00000493306 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
KLF4-204ENST00000493306 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
KLF4-204ENST00000493306 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
KLF4-204ENST00000493306 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
KLF4-204ENST00000493306 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
KLF4-204ENST00000493306 MT1AP04731 61 aa4.87□□□□□ -1.63
KLF4-204ENST00000493306 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
KLF4-204ENST00000493306 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
KLF4-204ENST00000493306 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
KLF4-204ENST00000493306 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
KLF4-204ENST00000493306 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
KLF4-204ENST00000493306 KRTAP6-3Q3LI67 103 aa4.77□□□□□ -1.65
KLF4-204ENST00000493306 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
KLF4-204ENST00000493306 PRM1P04553 51 aa4.72□□□□□ -1.65
KLF4-204ENST00000493306 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
KLF4-204ENST00000493306 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
KLF4-204ENST00000493306 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
KLF4-204ENST00000493306 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
KLF4-204ENST00000493306 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
KLF4-204ENST00000493306 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
KLF4-204ENST00000493306 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
KLF4-204ENST00000493306 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
KLF4-204ENST00000493306 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
KLF4-204ENST00000493306 LCE1EQ5T753 118 aa4.34□□□□□ -1.72
KLF4-204ENST00000493306 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
KLF4-204ENST00000493306 NEBP20929 6669 aa4.26□□□□□ -1.73
KLF4-204ENST00000493306 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
KLF4-204ENST00000493306 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
KLF4-204ENST00000493306 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
KLF4-204ENST00000493306 MT3P25713 68 aa4.17□□□□□ -1.74
KLF4-204ENST00000493306 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
KLF4-204ENST00000493306 SPRR2EP22531 72 aa4.14□□□□□ -1.75
KLF4-204ENST00000493306 SPRR2BP35325 72 aa4.14□□□□□ -1.75
KLF4-204ENST00000493306 SPRR2AP35326 72 aa4.14□□□□□ -1.75
KLF4-204ENST00000493306 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
KLF4-204ENST00000493306 SPRR2DP22532 72 aa3.94□□□□□ -1.78
KLF4-204ENST00000493306 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
KLF4-204ENST00000493306 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
KLF4-204ENST00000493306 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
KLF4-204ENST00000493306 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
KLF4-204ENST00000493306 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
KLF4-204ENST00000493306 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
KLF4-204ENST00000493306 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
KLF4-204ENST00000493306 MT4P47944 62 aa3.5□□□□□ -1.85
KLF4-204ENST00000493306 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
KLF4-204ENST00000493306 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
KLF4-204ENST00000493306 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
KLF4-204ENST00000493306 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
KLF4-204ENST00000493306 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
KLF4-204ENST00000493306 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
KLF4-204ENST00000493306 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
KLF4-204ENST00000493306 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
KLF4-204ENST00000493306 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
KLF4-204ENST00000493306 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
KLF4-204ENST00000493306 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
KLF4-204ENST00000493306 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
KLF4-204ENST00000493306 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
KLF4-204ENST00000493306 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
KLF4-204ENST00000493306 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
KLF4-204ENST00000493306 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
KLF4-204ENST00000493306 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
KLF4-204ENST00000493306 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
KLF4-204ENST00000493306 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
KLF4-204ENST00000493306 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
KLF4-204ENST00000493306 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
KLF4-204ENST00000493306 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
KLF4-204ENST00000493306 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
KLF4-204ENST00000493306 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 56 ms