RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
IRF1-210ENST00000493208 MT1LQ93083 61 aa4.81□□□□□ -1.64
IRF1-210ENST00000493208 MT1MQ8N339 61 aa4.8□□□□□ -1.64
IRF1-210ENST00000493208 V9GYY9 64 aa4.79□□□□□ -1.64
IRF1-210ENST00000493208 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
IRF1-210ENST00000493208 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
IRF1-210ENST00000493208 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
IRF1-210ENST00000493208 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
IRF1-210ENST00000493208 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
IRF1-210ENST00000493208 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
IRF1-210ENST00000493208 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
IRF1-210ENST00000493208 MT4P47944 62 aa4.66□□□□□ -1.66
IRF1-210ENST00000493208 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
IRF1-210ENST00000493208 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
IRF1-210ENST00000493208 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
IRF1-210ENST00000493208 Q1T7F1 81 aa4.61□□□□□ -1.67
IRF1-210ENST00000493208 PSPHP1O15172 72 aa4.6□□□□□ -1.67
IRF1-210ENST00000493208 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
IRF1-210ENST00000493208 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
IRF1-210ENST00000493208 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
IRF1-210ENST00000493208 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
IRF1-210ENST00000493208 A6NED7 52 aa4.53□□□□□ -1.68
IRF1-210ENST00000493208 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
IRF1-210ENST00000493208 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
IRF1-210ENST00000493208 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
IRF1-210ENST00000493208 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
IRF1-210ENST00000493208 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
IRF1-210ENST00000493208 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
IRF1-210ENST00000493208 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.71
IRF1-210ENST00000493208 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
IRF1-210ENST00000493208 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
IRF1-210ENST00000493208 ROMO1P60602 79 aa4.36□□□□□ -1.71
IRF1-210ENST00000493208 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
IRF1-210ENST00000493208 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
IRF1-210ENST00000493208 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
IRF1-210ENST00000493208 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
IRF1-210ENST00000493208 H3BS24 57 aa4.31□□□□□ -1.72
IRF1-210ENST00000493208 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
IRF1-210ENST00000493208 KRTAP5-7Q6L8G8 165 aa4.23□□□□□ -1.73
IRF1-210ENST00000493208 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
IRF1-210ENST00000493208 MT1AP04731 61 aa4.13□□□□□ -1.75
IRF1-210ENST00000493208 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
IRF1-210ENST00000493208 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
IRF1-210ENST00000493208 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
IRF1-210ENST00000493208 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
IRF1-210ENST00000493208 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
IRF1-210ENST00000493208 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
IRF1-210ENST00000493208 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
IRF1-210ENST00000493208 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
IRF1-210ENST00000493208 MT3P25713 68 aa3.85□□□□□ -1.79
IRF1-210ENST00000493208 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
IRF1-210ENST00000493208 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
IRF1-210ENST00000493208 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
IRF1-210ENST00000493208 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
IRF1-210ENST00000493208 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
IRF1-210ENST00000493208 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
IRF1-210ENST00000493208 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
IRF1-210ENST00000493208 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
IRF1-210ENST00000493208 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
IRF1-210ENST00000493208 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
IRF1-210ENST00000493208 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
IRF1-210ENST00000493208 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
IRF1-210ENST00000493208 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
IRF1-210ENST00000493208 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
IRF1-210ENST00000493208 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
IRF1-210ENST00000493208 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
IRF1-210ENST00000493208 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
IRF1-210ENST00000493208 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
IRF1-210ENST00000493208 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
IRF1-210ENST00000493208 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
IRF1-210ENST00000493208 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
IRF1-210ENST00000493208 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
IRF1-210ENST00000493208 INE1O15225 51 aa2.55□□□□□ -2
IRF1-210ENST00000493208 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
IRF1-210ENST00000493208 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
IRF1-210ENST00000493208 PRM1P04553 51 aa2.18□□□□□ -2.06
IRF1-210ENST00000493208 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
IRF1-210ENST00000493208 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 32.9 ms