RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	SNURF	Q9Y675	71 aa		4.68	□□□□□ -1.66
SAMM50-204	ENST00000493161	C10orf95	Q9H7T3	257 aa		4.67	□□□□□ -1.66
SAMM50-204	ENST00000493161	PCP4	P48539	62 aa		4.66	□□□□□ -1.66
SAMM50-204	ENST00000493161	KRTAP12-1	P59990	96 aa		4.66	□□□□□ -1.66
SAMM50-204	ENST00000493161	LCE3A	Q5TA76	89 aa		4.65	□□□□□ -1.67
SAMM50-204	ENST00000493161	KRTAP20-2	Q3LI61	65 aa		4.63	□□□□□ -1.67
SAMM50-204	ENST00000493161	SMIM20	Q8N5G0	67 aa		4.61	□□□□□ -1.67
SAMM50-204	ENST00000493161	SPRR5	A0A1B0GTR4	108 aa		4.6	□□□□□ -1.67
SAMM50-204	ENST00000493161	SPANXA2-OT1	Q8N9U9	137 aa		4.6	□□□□□ -1.67
SAMM50-204	ENST00000493161	SERP1	Q9Y6X1	66 aa		4.56	□□□□□ -1.68
SAMM50-204	ENST00000493161		A0A1B0GU33	70 aa		4.55	□□□□□ -1.68
SAMM50-204	ENST00000493161	COA5	Q86WW8	74 aa		4.55	□□□□□ -1.68
SAMM50-204	ENST00000493161	SEC61G	P60059	68 aa		4.54	□□□□□ -1.68
SAMM50-204	ENST00000493161	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.54	□□□□□ -1.68
SAMM50-204	ENST00000493161		A0A0A0MQY5	61 aa		4.48	□□□□□ -1.69
SAMM50-204	ENST00000493161	TNP1	P09430	55 aa		4.48	□□□□□ -1.69
SAMM50-204	ENST00000493161	SERP2	Q8N6R1	65 aa		4.48	□□□□□ -1.69
SAMM50-204	ENST00000493161		A8MU10	97 aa		4.46	□□□□□ -1.7
SAMM50-204	ENST00000493161	KRTAP12-4	P60329	112 aa		4.45	□□□□□ -1.7
SAMM50-204	ENST00000493161	SYNE1	Q8NF91	8797 aa	Known RBP	4.44	□□□□□ -1.7
SAMM50-204	ENST00000493161	KRTAP12-3	P60328	96 aa		4.44	□□□□□ -1.7
SAMM50-204	ENST00000493161	SMIM26	A0A096LP01	95 aa		4.38	□□□□□ -1.71
SAMM50-204	ENST00000493161	COX7C	P15954	63 aa		4.36	□□□□□ -1.71
SAMM50-204	ENST00000493161		H7BZZ5	65 aa		4.3	□□□□□ -1.72
SAMM50-204	ENST00000493161		A0A1B0GU69	56 aa		4.29	□□□□□ -1.72
SAMM50-204	ENST00000493161	ANAPC13	Q9BS18	74 aa		4.24	□□□□□ -1.73
SAMM50-204	ENST00000493161	MUC5AC	P98088	5654 aa		4.21	□□□□□ -1.74
SAMM50-204	ENST00000493161	AHNAK	Q09666	5890 aa	Known RBP	4.21	□□□□□ -1.74
SAMM50-204	ENST00000493161	KRTAP5-2	Q701N4	177 aa		4.21	□□□□□ -1.74
SAMM50-204	ENST00000493161	KRTAP5-8	O75690	187 aa		4.19	□□□□□ -1.74
SAMM50-204	ENST00000493161	CCDC179	H3BU77	68 aa		4.18	□□□□□ -1.74
SAMM50-204	ENST00000493161	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.14	□□□□□ -1.75
SAMM50-204	ENST00000493161	KRTAP6-1	Q3LI64	71 aa		4.13	□□□□□ -1.75
SAMM50-204	ENST00000493161	MT1A	P04731	61 aa		4.09	□□□□□ -1.75
SAMM50-204	ENST00000493161	ATP5E	P56381	51 aa	Predicted RBP	4.08	□□□□□ -1.76
SAMM50-204	ENST00000493161	LCE3C	Q5T5A8	94 aa		4.06	□□□□□ -1.76
SAMM50-204	ENST00000493161	OBSCN	Q5VST9	7968 aa		4.06	□□□□□ -1.76
SAMM50-204	ENST00000493161	KRTAP25-1	Q3LHN0	102 aa		4.04	□□□□□ -1.76
SAMM50-204	ENST00000493161	TMEM258	P61165	79 aa		4.02	□□□□□ -1.77
SAMM50-204	ENST00000493161	KRTAP6-2	Q3LI66	62 aa		4.01	□□□□□ -1.77
SAMM50-204	ENST00000493161	PRR15L	Q9BU68	103 aa		4.01	□□□□□ -1.77
SAMM50-204	ENST00000493161	LINC01558	Q9Y6Z2	57 aa		3.96	□□□□□ -1.78
SAMM50-204	ENST00000493161	KRTAP9-6	A8MVA2	160 aa		3.91	□□□□□ -1.78
SAMM50-204	ENST00000493161	UQCR11	O14957	56 aa		3.89	□□□□□ -1.79
SAMM50-204	ENST00000493161	KRTAP5-1	Q6L8H4	278 aa		3.86	□□□□□ -1.79
SAMM50-204	ENST00000493161	MIR22HG	Q0VDD5	57 aa		3.79	□□□□□ -1.8
SAMM50-204	ENST00000493161		Q1T7F1	81 aa		3.77	□□□□□ -1.81
SAMM50-204	ENST00000493161	MT3	P25713	68 aa		3.76	□□□□□ -1.81
SAMM50-204	ENST00000493161		V9GYY9	64 aa		3.76	□□□□□ -1.81
SAMM50-204	ENST00000493161	PSPHP1	O15172	72 aa		3.74	□□□□□ -1.81
SAMM50-204	ENST00000493161		K7ERS5	55 aa		3.72	□□□□□ -1.81
SAMM50-204	ENST00000493161	RPS28	P62857	69 aa	Known RBP	3.66	□□□□□ -1.82
SAMM50-204	ENST00000493161	PRAC1	Q96KF2	57 aa		3.66	□□□□□ -1.82
SAMM50-204	ENST00000493161		A6NED7	52 aa		3.61	□□□□□ -1.83
SAMM50-204	ENST00000493161	KRTAP5-11	Q6L8G4	156 aa		3.52	□□□□□ -1.85
SAMM50-204	ENST00000493161	LCE1E	Q5T753	118 aa		3.51	□□□□□ -1.85
SAMM50-204	ENST00000493161	CDC42SE1	Q9NRR8	79 aa		3.51	□□□□□ -1.85
SAMM50-204	ENST00000493161	NDUFAF8	A1L188	74 aa		3.46	□□□□□ -1.86
SAMM50-204	ENST00000493161	ROMO1	P60602	79 aa		3.46	□□□□□ -1.86
SAMM50-204	ENST00000493161	LCE1F	Q5T754	118 aa		3.43	□□□□□ -1.86
SAMM50-204	ENST00000493161	LCE1B	Q5T7P3	118 aa		3.39	□□□□□ -1.87
SAMM50-204	ENST00000493161	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.38	□□□□□ -1.87
SAMM50-204	ENST00000493161	LCE1C	Q5T751	118 aa		3.27	□□□□□ -1.89
SAMM50-204	ENST00000493161	BRK1	Q8WUW1	75 aa		3.2	□□□□□ -1.9
SAMM50-204	ENST00000493161	PMAIP1	Q13794	54 aa		3.01	□□□□□ -1.93
SAMM50-204	ENST00000493161	LCE3E	Q5T5B0	92 aa		2.96	□□□□□ -1.94
SAMM50-204	ENST00000493161	PHGR1	C9JFL3	82 aa		2.9	□□□□□ -1.95
SAMM50-204	ENST00000493161	PRO0628	Q9UI54	55 aa		2.87	□□□□□ -1.95
SAMM50-204	ENST00000493161	LCE3D	Q9BYE3	92 aa		2.84	□□□□□ -1.95
SAMM50-204	ENST00000493161	KRTAP4-4	Q9BYR3	166 aa		2.83	□□□□□ -1.96
SAMM50-204	ENST00000493161	KTN1-AS1	Q86SY8	53 aa		2.73	□□□□□ -1.97
SAMM50-204	ENST00000493161	KRTAP21-2	Q3LI59	83 aa		2.72	□□□□□ -1.97
SAMM50-204	ENST00000493161	MUC19	Q7Z5P9	8384 aa		2.52	□□□□□ -2.01
SAMM50-204	ENST00000493161	LUZP6	Q538Z0	58 aa		2.39	□□□□□ -2.03
SAMM50-204	ENST00000493161	KRTAP21-1	Q3LI58	79 aa		2.18	□□□□□ -2.06
SAMM50-204	ENST00000493161	PRM1	P04553	51 aa		1.77	□□□□□ -2.13
SAMM50-204	ENST00000493161	MUC16	Q8WXI7	14507 aa		1.76	□□□□□ -2.13
SAMM50-204	ENST00000493161	INE1	O15225	51 aa		1.62	□□□□□ -2.15

Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms