RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
C9orf78-206ENST00000492991 ANAPC13Q9BS18 74 aa5.54□□□□□ -1.52
C9orf78-206ENST00000492991 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
C9orf78-206ENST00000492991 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
C9orf78-206ENST00000492991 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
C9orf78-206ENST00000492991 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
C9orf78-206ENST00000492991 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
C9orf78-206ENST00000492991 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
C9orf78-206ENST00000492991 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
C9orf78-206ENST00000492991 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
C9orf78-206ENST00000492991 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
C9orf78-206ENST00000492991 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
C9orf78-206ENST00000492991 UQCR11O14957 56 aa5.35□□□□□ -1.55
C9orf78-206ENST00000492991 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
C9orf78-206ENST00000492991 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
C9orf78-206ENST00000492991 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
C9orf78-206ENST00000492991 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
C9orf78-206ENST00000492991 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
C9orf78-206ENST00000492991 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
C9orf78-206ENST00000492991 TMEM258P61165 79 aa5.25□□□□□ -1.57
C9orf78-206ENST00000492991 PCP4P48539 62 aa5.23□□□□□ -1.57
C9orf78-206ENST00000492991 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
C9orf78-206ENST00000492991 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
C9orf78-206ENST00000492991 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
C9orf78-206ENST00000492991 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
C9orf78-206ENST00000492991 K7ERS5 55 aa5.15□□□□□ -1.59
C9orf78-206ENST00000492991 KRTAP15-1Q3LI76 137 aa5.1□□□□□ -1.59
C9orf78-206ENST00000492991 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
C9orf78-206ENST00000492991 V9GYY9 64 aa5.01□□□□□ -1.61
C9orf78-206ENST00000492991 RPS28P62857 69 aaKnown RBP4.99□□□□□ -1.61
C9orf78-206ENST00000492991 Q1T7F1 81 aa4.95□□□□□ -1.62
C9orf78-206ENST00000492991 KRTAP5-2Q701N4 177 aa4.95□□□□□ -1.62
C9orf78-206ENST00000492991 PSPHP1O15172 72 aa4.94□□□□□ -1.62
C9orf78-206ENST00000492991 MT1AP04731 61 aa4.94□□□□□ -1.62
C9orf78-206ENST00000492991 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
C9orf78-206ENST00000492991 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
C9orf78-206ENST00000492991 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
C9orf78-206ENST00000492991 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
C9orf78-206ENST00000492991 A6NED7 52 aa4.78□□□□□ -1.64
C9orf78-206ENST00000492991 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
C9orf78-206ENST00000492991 ROMO1P60602 79 aa4.75□□□□□ -1.65
C9orf78-206ENST00000492991 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
C9orf78-206ENST00000492991 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
C9orf78-206ENST00000492991 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
C9orf78-206ENST00000492991 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
C9orf78-206ENST00000492991 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
C9orf78-206ENST00000492991 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
C9orf78-206ENST00000492991 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
C9orf78-206ENST00000492991 MT3P25713 68 aa4.54□□□□□ -1.68
C9orf78-206ENST00000492991 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
C9orf78-206ENST00000492991 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
C9orf78-206ENST00000492991 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
C9orf78-206ENST00000492991 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
C9orf78-206ENST00000492991 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
C9orf78-206ENST00000492991 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
C9orf78-206ENST00000492991 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
C9orf78-206ENST00000492991 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
C9orf78-206ENST00000492991 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
C9orf78-206ENST00000492991 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
C9orf78-206ENST00000492991 SVIPQ8NHG7 77 aa3.64□□□□□ -1.83
C9orf78-206ENST00000492991 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
C9orf78-206ENST00000492991 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
C9orf78-206ENST00000492991 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
C9orf78-206ENST00000492991 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
C9orf78-206ENST00000492991 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
C9orf78-206ENST00000492991 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
C9orf78-206ENST00000492991 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
C9orf78-206ENST00000492991 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
C9orf78-206ENST00000492991 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
C9orf78-206ENST00000492991 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
C9orf78-206ENST00000492991 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
C9orf78-206ENST00000492991 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
C9orf78-206ENST00000492991 A0A0A0MQY5 61 aa2.58□□□□□ -2
C9orf78-206ENST00000492991 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
C9orf78-206ENST00000492991 H3BS24 57 aa2.46□□□□□ -2.02
C9orf78-206ENST00000492991 INE1O15225 51 aa2.41□□□□□ -2.02
C9orf78-206ENST00000492991 PRM1P04553 51 aa2.38□□□□□ -2.03
C9orf78-206ENST00000492991 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 29.5 ms