RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 FAT4Q6V0I7 4981 aa1.83□□□□□ -2.12
FN1-224ENST00000492816 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
FN1-224ENST00000492816 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
FN1-224ENST00000492816 LCE2AQ5TA79 106 aaPredicted RBP1.8□□□□□ -2.12
FN1-224ENST00000492816 LCE1DQ5T752 114 aa1.8□□□□□ -2.12
FN1-224ENST00000492816 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
FN1-224ENST00000492816 LCE5AQ5TCM9 118 aa1.79□□□□□ -2.12
FN1-224ENST00000492816 MT1XP80297 61 aa1.77□□□□□ -2.13
FN1-224ENST00000492816 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
FN1-224ENST00000492816 KRTAP9-8Q9BYQ0 159 aa1.76□□□□□ -2.13
FN1-224ENST00000492816 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
FN1-224ENST00000492816 KRTAP2-2Q9BYT5 123 aa1.75□□□□□ -2.13
FN1-224ENST00000492816 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
FN1-224ENST00000492816 LCE4AQ5TA78 99 aa1.75□□□□□ -2.13
FN1-224ENST00000492816 MT1LQ93083 61 aa1.74□□□□□ -2.13
FN1-224ENST00000492816 MT1BP07438 61 aa1.73□□□□□ -2.13
FN1-224ENST00000492816 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
FN1-224ENST00000492816 LCE1EQ5T753 118 aa1.72□□□□□ -2.13
FN1-224ENST00000492816 LCE1FQ5T754 118 aa1.72□□□□□ -2.13
FN1-224ENST00000492816 LCE1AQ5T7P2 110 aa1.72□□□□□ -2.13
FN1-224ENST00000492816 KRTAP4-8A0A0G2JLE6 195 aa1.7□□□□□ -2.14
FN1-224ENST00000492816 KRTAP4-8Q9BYQ9 185 aa1.7□□□□□ -2.14
FN1-224ENST00000492816 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.69□□□□□ -2.14
FN1-224ENST00000492816 KRTAP9-9Q9BYP9 154 aa1.68□□□□□ -2.14
FN1-224ENST00000492816 MT1MQ8N339 61 aa1.67□□□□□ -2.14
FN1-224ENST00000492816 USH2AO75445 5202 aa1.67□□□□□ -2.14
FN1-224ENST00000492816 MT1EP04732 61 aa1.67□□□□□ -2.14
FN1-224ENST00000492816 SSPOA2VEC9 5147 aa1.63□□□□□ -2.15
FN1-224ENST00000492816 MT1AP04731 61 aa1.58□□□□□ -2.16
FN1-224ENST00000492816 KRTAP4-9Q9BYQ8 210 aa1.58□□□□□ -2.16
FN1-224ENST00000492816 LOC100996750A0A140TA64 210 aa1.54□□□□□ -2.16
FN1-224ENST00000492816 KRTAP4-6Q9BYQ5 205 aa1.54□□□□□ -2.16
FN1-224ENST00000492816 PRM1P04553 51 aa1.53□□□□□ -2.16
FN1-224ENST00000492816 KRTAP4-7Q9BYR0 210 aa1.51□□□□□ -2.17
FN1-224ENST00000492816 KMT2DO14686 5537 aa1.47□□□□□ -2.17
FN1-224ENST00000492816 KRTAP9-4Q9BYQ2 154 aa1.47□□□□□ -2.17
FN1-224ENST00000492816 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
FN1-224ENST00000492816 KRTAP4-3Q9BYR4 195 aa1.44□□□□□ -2.18
FN1-224ENST00000492816 OBSCNQ5VST9 7968 aa1.41□□□□□ -2.18
FN1-224ENST00000492816 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.18
FN1-224ENST00000492816 FSIP2Q5CZC0 6907 aa1.4□□□□□ -2.19
FN1-224ENST00000492816 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
FN1-224ENST00000492816 MUC12Q9UKN1 5478 aa1.36□□□□□ -2.19
FN1-224ENST00000492816 KRTAP19-7Q3SYF9 63 aa1.36□□□□□ -2.19
FN1-224ENST00000492816 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
FN1-224ENST00000492816 KRTAP9-6A8MVA2 160 aa1.35□□□□□ -2.19
FN1-224ENST00000492816 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
FN1-224ENST00000492816 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
FN1-224ENST00000492816 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
FN1-224ENST00000492816 KRTAP5-9P26371 169 aa1.26□□□□□ -2.21
FN1-224ENST00000492816 KRTAP4-12Q9BQ66 201 aa1.26□□□□□ -2.21
FN1-224ENST00000492816 DSTQ03001 7570 aaKnown RBP1.24□□□□□ -2.21
FN1-224ENST00000492816 KRTAP5-4Q6L8H1 288 aa1.24□□□□□ -2.21
FN1-224ENST00000492816 NEBP20929 6669 aa1.21□□□□□ -2.21
FN1-224ENST00000492816 KRTAP5-5Q701N2 237 aaPredicted RBP1.21□□□□□ -2.22
FN1-224ENST00000492816 KRTAP4-11Q9BYQ6 195 aa1.19□□□□□ -2.22
FN1-224ENST00000492816 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
FN1-224ENST00000492816 KRTAP4-2Q9BYR5 136 aa1.17□□□□□ -2.22
FN1-224ENST00000492816 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
FN1-224ENST00000492816 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
FN1-224ENST00000492816 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.11□□□□□ -2.23
FN1-224ENST00000492816 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
FN1-224ENST00000492816 KRTAP5-3Q6L8H2 238 aa1.1□□□□□ -2.23
FN1-224ENST00000492816 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
FN1-224ENST00000492816 HMCN1Q96RW7 5635 aa1.07□□□□□ -2.24
FN1-224ENST00000492816 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
FN1-224ENST00000492816 KRTAP5-2Q701N4 177 aa1.03□□□□□ -2.24
FN1-224ENST00000492816 MUC5ACP98088 5654 aa1□□□□□ -2.25
FN1-224ENST00000492816 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
FN1-224ENST00000492816 MUC19Q7Z5P9 8384 aa0.99□□□□□ -2.25
FN1-224ENST00000492816 KRTAP5-8O75690 187 aa0.94□□□□□ -2.26
FN1-224ENST00000492816 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
FN1-224ENST00000492816 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
FN1-224ENST00000492816 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
FN1-224ENST00000492816 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
FN1-224ENST00000492816 KRTAP5-11Q6L8G4 156 aa0.79□□□□□ -2.28
FN1-224ENST00000492816 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
FN1-224ENST00000492816 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms