RNA–Protein interactions for RNA: ENST00000492809.5

PCBP4-215, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-215ENST00000492809 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.18□□□□□ -1.58
PCBP4-215ENST00000492809 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
PCBP4-215ENST00000492809 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
PCBP4-215ENST00000492809 MT1EP04732 61 aa5.08□□□□□ -1.6
PCBP4-215ENST00000492809 MT1LQ93083 61 aa5.07□□□□□ -1.6
PCBP4-215ENST00000492809 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
PCBP4-215ENST00000492809 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
PCBP4-215ENST00000492809 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
PCBP4-215ENST00000492809 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
PCBP4-215ENST00000492809 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
PCBP4-215ENST00000492809 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
PCBP4-215ENST00000492809 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
PCBP4-215ENST00000492809 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
PCBP4-215ENST00000492809 MT1MQ8N339 61 aa4.75□□□□□ -1.65
PCBP4-215ENST00000492809 MT1GP13640 62 aa4.74□□□□□ -1.65
PCBP4-215ENST00000492809 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
PCBP4-215ENST00000492809 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
PCBP4-215ENST00000492809 NEBP20929 6669 aa4.65□□□□□ -1.67
PCBP4-215ENST00000492809 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
PCBP4-215ENST00000492809 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
PCBP4-215ENST00000492809 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.68
PCBP4-215ENST00000492809 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
PCBP4-215ENST00000492809 KRTAP5-9P26371 169 aa4.45□□□□□ -1.7
PCBP4-215ENST00000492809 MT1AP04731 61 aa4.4□□□□□ -1.7
PCBP4-215ENST00000492809 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
PCBP4-215ENST00000492809 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
PCBP4-215ENST00000492809 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
PCBP4-215ENST00000492809 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
PCBP4-215ENST00000492809 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.72
PCBP4-215ENST00000492809 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
PCBP4-215ENST00000492809 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
PCBP4-215ENST00000492809 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
PCBP4-215ENST00000492809 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
PCBP4-215ENST00000492809 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
PCBP4-215ENST00000492809 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
PCBP4-215ENST00000492809 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
PCBP4-215ENST00000492809 PRM1P04553 51 aa4.22□□□□□ -1.73
PCBP4-215ENST00000492809 SPRR2EP22531 72 aa4.2□□□□□ -1.74
PCBP4-215ENST00000492809 SPRR2BP35325 72 aa4.2□□□□□ -1.74
PCBP4-215ENST00000492809 SPRR2AP35326 72 aa4.2□□□□□ -1.74
PCBP4-215ENST00000492809 SPRR2DP22532 72 aa4.07□□□□□ -1.76
PCBP4-215ENST00000492809 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.77
PCBP4-215ENST00000492809 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
PCBP4-215ENST00000492809 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
PCBP4-215ENST00000492809 MT3P25713 68 aa3.83□□□□□ -1.8
PCBP4-215ENST00000492809 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
PCBP4-215ENST00000492809 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
PCBP4-215ENST00000492809 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
PCBP4-215ENST00000492809 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
PCBP4-215ENST00000492809 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
PCBP4-215ENST00000492809 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
PCBP4-215ENST00000492809 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
PCBP4-215ENST00000492809 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
PCBP4-215ENST00000492809 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
PCBP4-215ENST00000492809 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
PCBP4-215ENST00000492809 MT4P47944 62 aa3.55□□□□□ -1.84
PCBP4-215ENST00000492809 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
PCBP4-215ENST00000492809 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
PCBP4-215ENST00000492809 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
PCBP4-215ENST00000492809 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
PCBP4-215ENST00000492809 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
PCBP4-215ENST00000492809 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
PCBP4-215ENST00000492809 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
PCBP4-215ENST00000492809 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
PCBP4-215ENST00000492809 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
PCBP4-215ENST00000492809 KRTAP5-8O75690 187 aa3□□□□□ -1.93
PCBP4-215ENST00000492809 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
PCBP4-215ENST00000492809 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
PCBP4-215ENST00000492809 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
PCBP4-215ENST00000492809 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
PCBP4-215ENST00000492809 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
PCBP4-215ENST00000492809 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
PCBP4-215ENST00000492809 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
PCBP4-215ENST00000492809 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
PCBP4-215ENST00000492809 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
PCBP4-215ENST00000492809 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
PCBP4-215ENST00000492809 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
PCBP4-215ENST00000492809 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 39.4 ms