RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
SND1-215ENST00000492772 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
SND1-215ENST00000492772 COA5Q86WW8 74 aa3.76□□□□□ -1.81
SND1-215ENST00000492772 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
SND1-215ENST00000492772 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
SND1-215ENST00000492772 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
SND1-215ENST00000492772 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
SND1-215ENST00000492772 SPATA8Q6RVD6 105 aa3.72□□□□□ -1.81
SND1-215ENST00000492772 PSPHP1O15172 72 aa3.71□□□□□ -1.82
SND1-215ENST00000492772 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
SND1-215ENST00000492772 SERP1Q9Y6X1 66 aa3.71□□□□□ -1.82
SND1-215ENST00000492772 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
SND1-215ENST00000492772 COX7CP15954 63 aa3.69□□□□□ -1.82
SND1-215ENST00000492772 H7BZZ5 65 aa3.68□□□□□ -1.82
SND1-215ENST00000492772 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
SND1-215ENST00000492772 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
SND1-215ENST00000492772 A0A1B0GU33 70 aa3.66□□□□□ -1.82
SND1-215ENST00000492772 TNP1P09430 55 aa3.65□□□□□ -1.83
SND1-215ENST00000492772 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
SND1-215ENST00000492772 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
SND1-215ENST00000492772 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
SND1-215ENST00000492772 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
SND1-215ENST00000492772 ANAPC13Q9BS18 74 aa3.62□□□□□ -1.83
SND1-215ENST00000492772 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
SND1-215ENST00000492772 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
SND1-215ENST00000492772 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
SND1-215ENST00000492772 A0A1B0GU69 56 aa3.54□□□□□ -1.84
SND1-215ENST00000492772 A8MU10 97 aa3.52□□□□□ -1.85
SND1-215ENST00000492772 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
SND1-215ENST00000492772 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
SND1-215ENST00000492772 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
SND1-215ENST00000492772 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
SND1-215ENST00000492772 ATP5EP56381 51 aaPredicted RBP3.44□□□□□ -1.86
SND1-215ENST00000492772 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
SND1-215ENST00000492772 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
SND1-215ENST00000492772 CCDC179H3BU77 68 aa3.42□□□□□ -1.86
SND1-215ENST00000492772 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
SND1-215ENST00000492772 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
SND1-215ENST00000492772 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
SND1-215ENST00000492772 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
SND1-215ENST00000492772 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
SND1-215ENST00000492772 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
SND1-215ENST00000492772 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
SND1-215ENST00000492772 K7ERS5 55 aa3.34□□□□□ -1.87
SND1-215ENST00000492772 UQCR11O14957 56 aa3.32□□□□□ -1.88
SND1-215ENST00000492772 MT1AP04731 61 aa3.31□□□□□ -1.88
SND1-215ENST00000492772 TMEM258P61165 79 aa3.31□□□□□ -1.88
SND1-215ENST00000492772 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
SND1-215ENST00000492772 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
SND1-215ENST00000492772 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
SND1-215ENST00000492772 A6NED7 52 aa3.25□□□□□ -1.89
SND1-215ENST00000492772 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
SND1-215ENST00000492772 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
SND1-215ENST00000492772 MIR22HGQ0VDD5 57 aa3.22□□□□□ -1.89
SND1-215ENST00000492772 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
SND1-215ENST00000492772 Q1T7F1 81 aa3.15□□□□□ -1.91
SND1-215ENST00000492772 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
SND1-215ENST00000492772 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
SND1-215ENST00000492772 ROMO1P60602 79 aa3.05□□□□□ -1.92
SND1-215ENST00000492772 MT3P25713 68 aa3.04□□□□□ -1.92
SND1-215ENST00000492772 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
SND1-215ENST00000492772 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
SND1-215ENST00000492772 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
SND1-215ENST00000492772 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
SND1-215ENST00000492772 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SND1-215ENST00000492772 INE1O15225 51 aa2.54□□□□□ -2
SND1-215ENST00000492772 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
SND1-215ENST00000492772 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
SND1-215ENST00000492772 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
SND1-215ENST00000492772 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SND1-215ENST00000492772 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
SND1-215ENST00000492772 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SND1-215ENST00000492772 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
SND1-215ENST00000492772 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SND1-215ENST00000492772 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
SND1-215ENST00000492772 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
SND1-215ENST00000492772 PRM1P04553 51 aa1.49□□□□□ -2.17
SND1-215ENST00000492772 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 62.1 ms