RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 KRTAP4-9Q9BYQ8 210 aa2.31□□□□□ -2.04
UBP1-212ENST00000492136 KRTAP4-8A0A0G2JLE6 195 aa2.3□□□□□ -2.04
UBP1-212ENST00000492136 KRTAP4-8Q9BYQ9 185 aa2.3□□□□□ -2.04
UBP1-212ENST00000492136 LCE4AQ5TA78 99 aa2.3□□□□□ -2.04
UBP1-212ENST00000492136 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
UBP1-212ENST00000492136 LRP2P98164 4655 aa2.27□□□□□ -2.05
UBP1-212ENST00000492136 LPAP08519 4548 aa2.26□□□□□ -2.05
UBP1-212ENST00000492136 MT1XP80297 61 aa2.25□□□□□ -2.05
UBP1-212ENST00000492136 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
UBP1-212ENST00000492136 KRTAP19-4Q3LI73 84 aa2.25□□□□□ -2.05
UBP1-212ENST00000492136 PRM1P04553 51 aa2.23□□□□□ -2.05
UBP1-212ENST00000492136 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
UBP1-212ENST00000492136 KRTAP9-7A8MTY7 169 aa2.2□□□□□ -2.06
UBP1-212ENST00000492136 LOC100996750A0A140TA64 210 aa2.2□□□□□ -2.06
UBP1-212ENST00000492136 HSPG2P98160 4391 aa2.16□□□□□ -2.06
UBP1-212ENST00000492136 MT1BP07438 61 aa2.13□□□□□ -2.07
UBP1-212ENST00000492136 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
UBP1-212ENST00000492136 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
UBP1-212ENST00000492136 KRTAP9-8Q9BYQ0 159 aa2.11□□□□□ -2.07
UBP1-212ENST00000492136 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
UBP1-212ENST00000492136 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
UBP1-212ENST00000492136 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
UBP1-212ENST00000492136 MT3P25713 68 aa2.08□□□□□ -2.08
UBP1-212ENST00000492136 MT1LQ93083 61 aa2.07□□□□□ -2.08
UBP1-212ENST00000492136 KMT2DO14686 5537 aa2.05□□□□□ -2.08
UBP1-212ENST00000492136 KRTAP9-3Q9BYQ3 159 aa2.05□□□□□ -2.08
UBP1-212ENST00000492136 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.08
UBP1-212ENST00000492136 MT1EP04732 61 aa2.03□□□□□ -2.08
UBP1-212ENST00000492136 KRTAP9-9Q9BYP9 154 aa2.03□□□□□ -2.08
UBP1-212ENST00000492136 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
UBP1-212ENST00000492136 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.09
UBP1-212ENST00000492136 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
UBP1-212ENST00000492136 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
UBP1-212ENST00000492136 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
UBP1-212ENST00000492136 MT1MQ8N339 61 aa1.99□□□□□ -2.09
UBP1-212ENST00000492136 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
UBP1-212ENST00000492136 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.96□□□□□ -2.1
UBP1-212ENST00000492136 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
UBP1-212ENST00000492136 KRTAP4-6Q9BYQ5 205 aa1.9□□□□□ -2.11
UBP1-212ENST00000492136 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
UBP1-212ENST00000492136 KRTAP2-2Q9BYT5 123 aa1.88□□□□□ -2.11
UBP1-212ENST00000492136 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
UBP1-212ENST00000492136 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
UBP1-212ENST00000492136 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
UBP1-212ENST00000492136 KRTAP4-12Q9BQ66 201 aa1.86□□□□□ -2.11
UBP1-212ENST00000492136 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
UBP1-212ENST00000492136 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
UBP1-212ENST00000492136 MT1AP04731 61 aa1.82□□□□□ -2.12
UBP1-212ENST00000492136 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
UBP1-212ENST00000492136 OBSCNQ5VST9 7968 aa1.78□□□□□ -2.12
UBP1-212ENST00000492136 KRTAP9-4Q9BYQ2 154 aa1.75□□□□□ -2.13
UBP1-212ENST00000492136 MACF1Q9UPN3 7388 aaKnown RBP1.7□□□□□ -2.14
UBP1-212ENST00000492136 KRTAP4-11Q9BYQ6 195 aa1.68□□□□□ -2.14
UBP1-212ENST00000492136 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
UBP1-212ENST00000492136 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
UBP1-212ENST00000492136 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
UBP1-212ENST00000492136 KRTAP9-6A8MVA2 160 aa1.65□□□□□ -2.15
UBP1-212ENST00000492136 NEBP20929 6669 aa1.63□□□□□ -2.15
UBP1-212ENST00000492136 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.15
UBP1-212ENST00000492136 KRTAP5-9P26371 169 aa1.56□□□□□ -2.16
UBP1-212ENST00000492136 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
UBP1-212ENST00000492136 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
UBP1-212ENST00000492136 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
UBP1-212ENST00000492136 KRTAP5-5Q701N2 237 aaPredicted RBP1.41□□□□□ -2.18
UBP1-212ENST00000492136 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
UBP1-212ENST00000492136 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
UBP1-212ENST00000492136 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
UBP1-212ENST00000492136 KRTAP5-4Q6L8H1 288 aa1.28□□□□□ -2.2
UBP1-212ENST00000492136 KRTAP5-3Q6L8H2 238 aa1.28□□□□□ -2.2
UBP1-212ENST00000492136 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
UBP1-212ENST00000492136 KRTAP5-8O75690 187 aa1.09□□□□□ -2.23
UBP1-212ENST00000492136 KRTAP5-2Q701N4 177 aa1.07□□□□□ -2.24
UBP1-212ENST00000492136 KRTAP5-1Q6L8H4 278 aa0.95□□□□□ -2.26
UBP1-212ENST00000492136 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
UBP1-212ENST00000492136 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.83□□□□□ -2.28
UBP1-212ENST00000492136 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
UBP1-212ENST00000492136 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
UBP1-212ENST00000492136 KRTAP5-11Q6L8G4 156 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 518.9 ms