RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 V9GYY9 64 aa5.25□□□□□ -1.57
TOM1-215ENST00000491987 TMEM258P61165 79 aa5.24□□□□□ -1.57
TOM1-215ENST00000491987 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
TOM1-215ENST00000491987 RPS28P62857 69 aaKnown RBP5.22□□□□□ -1.57
TOM1-215ENST00000491987 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.57
TOM1-215ENST00000491987 UQCR11O14957 56 aa5.21□□□□□ -1.58
TOM1-215ENST00000491987 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
TOM1-215ENST00000491987 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
TOM1-215ENST00000491987 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
TOM1-215ENST00000491987 MT4P47944 62 aa5.16□□□□□ -1.58
TOM1-215ENST00000491987 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
TOM1-215ENST00000491987 HMCN1Q96RW7 5635 aa5.12□□□□□ -1.59
TOM1-215ENST00000491987 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
TOM1-215ENST00000491987 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
TOM1-215ENST00000491987 KRTAP5-4Q6L8H1 288 aa5.08□□□□□ -1.6
TOM1-215ENST00000491987 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
TOM1-215ENST00000491987 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
TOM1-215ENST00000491987 K7ERS5 55 aa5□□□□□ -1.61
TOM1-215ENST00000491987 PSPHP1O15172 72 aa4.99□□□□□ -1.61
TOM1-215ENST00000491987 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
TOM1-215ENST00000491987 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
TOM1-215ENST00000491987 Q1T7F1 81 aa4.92□□□□□ -1.62
TOM1-215ENST00000491987 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
TOM1-215ENST00000491987 H3BS24 57 aa4.85□□□□□ -1.63
TOM1-215ENST00000491987 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
TOM1-215ENST00000491987 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
TOM1-215ENST00000491987 A6NED7 52 aa4.81□□□□□ -1.64
TOM1-215ENST00000491987 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
TOM1-215ENST00000491987 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
TOM1-215ENST00000491987 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
TOM1-215ENST00000491987 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
TOM1-215ENST00000491987 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
TOM1-215ENST00000491987 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
TOM1-215ENST00000491987 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
TOM1-215ENST00000491987 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
TOM1-215ENST00000491987 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
TOM1-215ENST00000491987 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
TOM1-215ENST00000491987 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
TOM1-215ENST00000491987 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
TOM1-215ENST00000491987 ROMO1P60602 79 aa4.66□□□□□ -1.66
TOM1-215ENST00000491987 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
TOM1-215ENST00000491987 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
TOM1-215ENST00000491987 MT1AP04731 61 aa4.54□□□□□ -1.68
TOM1-215ENST00000491987 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
TOM1-215ENST00000491987 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
TOM1-215ENST00000491987 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
TOM1-215ENST00000491987 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
TOM1-215ENST00000491987 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
TOM1-215ENST00000491987 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
TOM1-215ENST00000491987 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
TOM1-215ENST00000491987 MT3P25713 68 aa4.15□□□□□ -1.75
TOM1-215ENST00000491987 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
TOM1-215ENST00000491987 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
TOM1-215ENST00000491987 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
TOM1-215ENST00000491987 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
TOM1-215ENST00000491987 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
TOM1-215ENST00000491987 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
TOM1-215ENST00000491987 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
TOM1-215ENST00000491987 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
TOM1-215ENST00000491987 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
TOM1-215ENST00000491987 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
TOM1-215ENST00000491987 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
TOM1-215ENST00000491987 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
TOM1-215ENST00000491987 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
TOM1-215ENST00000491987 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
TOM1-215ENST00000491987 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
TOM1-215ENST00000491987 INE1O15225 51 aa3.23□□□□□ -1.89
TOM1-215ENST00000491987 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
TOM1-215ENST00000491987 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
TOM1-215ENST00000491987 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
TOM1-215ENST00000491987 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
TOM1-215ENST00000491987 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
TOM1-215ENST00000491987 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
TOM1-215ENST00000491987 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
TOM1-215ENST00000491987 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
TOM1-215ENST00000491987 PRM1P04553 51 aa2.39□□□□□ -2.03
TOM1-215ENST00000491987 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
TOM1-215ENST00000491987 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 110.9 ms