RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 MT1MQ8N339 61 aa6.21□□□□□ -1.42
SMARCD3-214ENST00000491651 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
SMARCD3-214ENST00000491651 V9GYY9 64 aa6.19□□□□□ -1.42
SMARCD3-214ENST00000491651 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
SMARCD3-214ENST00000491651 Q1T7F1 81 aa6.15□□□□□ -1.42
SMARCD3-214ENST00000491651 K7ERS5 55 aa6.13□□□□□ -1.43
SMARCD3-214ENST00000491651 PSPHP1O15172 72 aa6.09□□□□□ -1.43
SMARCD3-214ENST00000491651 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
SMARCD3-214ENST00000491651 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
SMARCD3-214ENST00000491651 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
SMARCD3-214ENST00000491651 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
SMARCD3-214ENST00000491651 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
SMARCD3-214ENST00000491651 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
SMARCD3-214ENST00000491651 A6NED7 52 aa5.91□□□□□ -1.46
SMARCD3-214ENST00000491651 MT4P47944 62 aa5.9□□□□□ -1.46
SMARCD3-214ENST00000491651 KRTAP5-4Q6L8H1 288 aa5.89□□□□□ -1.47
SMARCD3-214ENST00000491651 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
SMARCD3-214ENST00000491651 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
SMARCD3-214ENST00000491651 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
SMARCD3-214ENST00000491651 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
SMARCD3-214ENST00000491651 CDC42SE1Q9NRR8 79 aa5.79□□□□□ -1.48
SMARCD3-214ENST00000491651 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
SMARCD3-214ENST00000491651 PRO0628Q9UI54 55 aa5.75□□□□□ -1.49
SMARCD3-214ENST00000491651 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
SMARCD3-214ENST00000491651 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
SMARCD3-214ENST00000491651 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
SMARCD3-214ENST00000491651 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
SMARCD3-214ENST00000491651 ROMO1P60602 79 aa5.67□□□□□ -1.5
SMARCD3-214ENST00000491651 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
SMARCD3-214ENST00000491651 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
SMARCD3-214ENST00000491651 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
SMARCD3-214ENST00000491651 KRTAP5-10Q6L8G5 202 aa5.56□□□□□ -1.52
SMARCD3-214ENST00000491651 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
SMARCD3-214ENST00000491651 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
SMARCD3-214ENST00000491651 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
SMARCD3-214ENST00000491651 PMAIP1Q13794 54 aa5.46□□□□□ -1.54
SMARCD3-214ENST00000491651 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
SMARCD3-214ENST00000491651 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
SMARCD3-214ENST00000491651 MT1AP04731 61 aa5.33□□□□□ -1.56
SMARCD3-214ENST00000491651 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
SMARCD3-214ENST00000491651 KTN1-AS1Q86SY8 53 aa5.3□□□□□ -1.56
SMARCD3-214ENST00000491651 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
SMARCD3-214ENST00000491651 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
SMARCD3-214ENST00000491651 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
SMARCD3-214ENST00000491651 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
SMARCD3-214ENST00000491651 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
SMARCD3-214ENST00000491651 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
SMARCD3-214ENST00000491651 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
SMARCD3-214ENST00000491651 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
SMARCD3-214ENST00000491651 MT3P25713 68 aa4.88□□□□□ -1.63
SMARCD3-214ENST00000491651 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
SMARCD3-214ENST00000491651 AHNAKQ09666 5890 aaKnown RBP4.71□□□□□ -1.66
SMARCD3-214ENST00000491651 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
SMARCD3-214ENST00000491651 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
SMARCD3-214ENST00000491651 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
SMARCD3-214ENST00000491651 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
SMARCD3-214ENST00000491651 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
SMARCD3-214ENST00000491651 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
SMARCD3-214ENST00000491651 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
SMARCD3-214ENST00000491651 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
SMARCD3-214ENST00000491651 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
SMARCD3-214ENST00000491651 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
SMARCD3-214ENST00000491651 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
SMARCD3-214ENST00000491651 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
SMARCD3-214ENST00000491651 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
SMARCD3-214ENST00000491651 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
SMARCD3-214ENST00000491651 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
SMARCD3-214ENST00000491651 H3BS24 57 aa3.7□□□□□ -1.82
SMARCD3-214ENST00000491651 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
SMARCD3-214ENST00000491651 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
SMARCD3-214ENST00000491651 INE1O15225 51 aa3.46□□□□□ -1.86
SMARCD3-214ENST00000491651 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
SMARCD3-214ENST00000491651 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
SMARCD3-214ENST00000491651 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
SMARCD3-214ENST00000491651 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
SMARCD3-214ENST00000491651 PRM1P04553 51 aa2.89□□□□□ -1.95
SMARCD3-214ENST00000491651 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
SMARCD3-214ENST00000491651 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 90 ms